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1:  AAT79466Reports  DNA polymerase [V...[gi:50593436] BLink, Conserved Domains, Links
LOCUS       AAT79466                1219 aa            linear   VRL 09-MAY-2005
DEFINITION  DNA polymerase [Vulture herpesvirus].
ACCESSION   AAT79466
VERSION     AAT79466.1  GI:50593436
DBSOURCE    accession AY571851.1
KEYWORDS    .
SOURCE      Vulture herpesvirus
  ORGANISM  Vulture herpesvirus
            Viruses; dsDNA viruses, no RNA stage; Herpesviridae;
            Alphaherpesvirinae.
REFERENCE   1  (residues 1 to 1219)
  AUTHORS   Cardoso,M., Hyatt,A., Selleck,P., Lowther,S., Prakash,V., Pain,D.,
            Cunningham,A.A. and Boyle,D.
  TITLE     Phylogenetic analysis of the DNA polymerase gene of a novel
            alphaherpesvirus isolated from an Indian gyps vulture
  JOURNAL   Virus Genes 30 (3), 371-381 (2005)
   PUBMED   15830156
REFERENCE   2  (residues 1 to 1219)
  AUTHORS   Cardoso,M.J. and Boyle,D.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAR-2004) Australian Animal Health Laboratories,
            CSIRO Livestock Industries, Private Bag 24, Geelong, VIC 3220,
            Australia
COMMENT     Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Vulture herpesvirus"
                     /specific_host="Gyps indicus"
                     /db_xref="taxon:285986"
                     /country="India"
     Protein         1..1219
                     /product="DNA polymerase"
     Region          345..918
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family; DNA directed DNA
                     polymerase. Posseses DNA binding, polymerase and 3'-5'
                     exonuclease activity; cd00145"
                     /db_xref="CDD:29064"
     Region          601..1170
                     /region_name="DNA_pol_B"
                     /note="DNA polymerase family B. This region of DNA
                     polymerase B appears to consist of more than one
                     structural domain, possibly including elongation,
                     DNA-binding and dNTP binding activities; pfam00136"
                     /db_xref="CDD:64022"
     CDS             1..1219
                     /gene="UL30"
                     /coded_by="AY571851.1:1..3660"
ORIGIN      
        1 megregfynp flkknrdlwk knkdgqqsrr kdhsyytdik efkfvaprcl dedaapsdrr
       61 gmhigslars pkaylngker nileysgeem wprrmlvwdg vsyrpdgydp rfekvhvydf
      121 vettetisad gshlaerfan slrpsgtvvt llgmtacgkr iaihvygvsq yfymnkveid
      181 aacgskngfd laekmasvlr asafggggdg pagrgnewsg pkfsfktata dcfeidvvtr
      241 tdvyyfdtps cefyrikarn grfvsficdn fypevkkyeg nvdaltrlil dnagfstfgw
      301 yrlkpgcrge kvqvrrtenh vtssdveinc tpdnlepdae daawpeyklm cfdieckagg
      361 anelafpiat nqedvviqis cllysirske legiilfslg scdlsgefle raaaegwpkp
      421 tvlefdsefe lllafftflk qyspefvtgy nivnfdwayl fakatkvynm rldgygrmnr
      481 ggmfkvwemg tnffqkkskv kingvislda ysvavdklki psykldavae aalgerkkdl
      541 sykdipryfa agavkrgvig eyciqdsvla gkiffkylph lelaavarla gialsrvifd
      601 gqqirvftcl lrlagdrgfi lpdfrgrfgs sraddgveaa vnatlldsie ddavdddesd
      661 eqgssqgsgd kpdkaqastq grvvgyqgak vldplpgfhi dpvtvfdfas lypsiiqahn
      721 lcystltlkp eavahlksgd dylditvgeq rlffvrphvr esllsvllkd wlamrksira
      781 kipdsseeea llldkqqaai kvvcnsvygf tgvsngllpc lqvaatvtti grdmllatrd
      841 yvhekwatpe llmsafpdta eyliggthye akiiygdtds vfvrfsgvrp eglvslgdam
      901 akkissdlfr apiklecekt fiklllitkk kyigvinggk mlmkgvdlvr knnchfinsy
      961 akrlvdllfr denvaaaaae vtkepakvwl srslpagldv fgstlaeayr riangdldvk
     1021 dfvmtaelsr speayvnkrv phltvyyklm frgeqvptik ervpyvvisq tqeaekeale
     1081 vaklrgdlkr phpgddepdl apgrrqpkkr kmlvselaed pvyvtshsip lntdyyfshl
     1141 lstlsvtfka lfnndvktte illrrfipes hnsteevrer lvragfdvlt fpetsvmeee
     1201 nlqklstafc ilagalrpa
//

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