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1:  AAF66765Reports  DNA polymerase [G...[gi:7673141] BLink, Conserved Domains, Links
LOCUS       AAF66765                1218 aa            linear   VRL 29-JUN-2004
DEFINITION  DNA polymerase [Gallid herpesvirus 2].
ACCESSION   AAF66765
VERSION     AAF66765.1  GI:7673141
DBSOURCE    accession AF147806.2
KEYWORDS    .
SOURCE      Gallid herpesvirus 2 (GaHV-2)
  ORGANISM  Gallid herpesvirus 2
            Viruses; dsDNA viruses, no RNA stage; Herpesviridae;
            Alphaherpesvirinae; Mardivirus.
REFERENCE   1  (residues 1 to 1218)
  AUTHORS   Lee,L.F., Wu,P., Sui,D., Ren,D., Kamil,J., Kung,H.J. and
            Witter,R.L.
  TITLE     The complete unique long sequence and the overall genomic
            organization of the GA strain of Marek's disease virus
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 97 (11), 6091-6096 (2000)
   PUBMED   10823954
REFERENCE   2  (residues 1 to 1218)
  AUTHORS   Lee,L.F., Wu,P., Sui,D., Ren,D., Kung,H.J. and Witter,R.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-1999) USDA_ARS Avian Disease and Oncology
            Laboratory, 3606 East Mount Hope Road, East Lansing, MI 48823, USA
REFERENCE   3  (residues 1 to 1218)
  AUTHORS   Lee,L.F., Wu,P., Sui,D., Ren,D., Kung,H.J. and Witter,R.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2004) USDA_ARS Avian Disease and Oncology
            Laboratory, 3606 East Mount Hope Road, East Lansing, MI 48823, USA
  REMARK    Sequence update by submitter
COMMENT     Method: conceptual translation supplied by author.
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Gallid herpesvirus 2"
                     /strain="GA"
                     /serotype="1"
                     /db_xref="taxon:10390"
     Protein         1..1218
                     /product="DNA polymerase"
     Region          350..908
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family; DNA directed DNA
                     polymerase. Posseses DNA binding, polymerase and 3'-5'
                     exonuclease activity; cd00145"
                     /db_xref="CDD:29064"
     Region          606..1168
                     /region_name="DNA_pol_B"
                     /note="DNA polymerase family B. This region of DNA
                     polymerase B appears to consist of more than one
                     structural domain, possibly including elongation,
                     DNA-binding and dNTP binding activities; pfam00136"
                     /db_xref="CDD:64022"
     CDS             1..1218
                     /gene="UL30"
                     /coded_by="AF147806.2:68705..72361"
ORIGIN      
        1 msvdgtktff npyigarkrs learnglsfs tgqnydeknn rrdrnsityv ttidefkyia
       61 pkclddkdvk qkgthigklk rspvlyknge eyvflnfedc edvwprrcsi wnnrsflpad
      121 fdprfsrfhv ydmietvefa saaidrdknr flellrpmgt ivtmmgitec gkrvavhvyg
      181 ikpyfymrkv dtdticgtrc prelaeklan vvrssvneva nakrfctpvt rtvsadcfev
      241 dvvqrkdiyy ygtghdefyr vksqsgkfit llcdnfypsi ikyegnidai trmvldnngf
      301 stfgwysfkv gnngekvqvr apchhctscd ieinctvdnl igypeddawp dykllcfdie
      361 cksggvneca fpcatneedv viqiscllys intkqlehal lfalgacdlp qtfketfqss
      421 ynilpivlef dsefelllaf mtfikqyape fvtgynivnf dwafivtklt tvynmrldgy
      481 gvvnqkgmfk vwdagtnrfq kkgkfkatgm itldmysiat eklklqsykl dvvaeaalge
      541 rkkelsykei pshfaagpek rgiigeyclq dsllvgklff kyiphlelsa iaklagills
      601 kaifdgqqir vytcllrlei dgfilpeknk kfaetvsltc eedqteiceh dspqepihni
      661 kqsslchsns grtigyqgak vldpisgfhv hpvmvfdfas lypsiiqahn lcfttlvhdd
      721 tnlsnlrpqd dyleinvqgk llrfvkphir esllaillkd wlamrkaira kipescdeia
      781 vlldkqqaai kvvcnsvygf cgvsngllpc idvaatvtti grnmlltvrd yihkqwgtrd
      841 allrefpnls nfmrpedysv sviygdtdsv fikfkgvdih glvttgddma krvssdlfpk
      901 piklecektf nklllitkkk ymgtihggrm lmkgvdivrk nncrfintya kklsdllfld
      961 dtvakaaatv aekpppfwat splpeglnsf ggvlaeaytr mminniteve dfamsaelsr
     1021 ppdaytnkri phltvyykla mrseqlpvvk drisyviaaa tpevvrdsar vaefrgeldl
     1081 chqnsntscp gdsvmtnket yvrhsprnkl lisdmaedpk yllannipln tdyylshllg
     1141 tlcvtfkalf gndvkitetv lrrfipetft edvvtrnvss emfttirngi glqvneeeet
     1201 rrklniafri ltatphry
//

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