Tree view for rid: , query ID: , database:

This tree was produced using BLAST pairwise alignments. more...

  Help:Tree method
Algorithm used to produce a tree from a given matrix of distances. For BLASTN or megaBLAST the Jukes-Cantor method is used to calculate the distances, for all other programs the Kimura method is used.
  Help:Sequence Label
Text used in the tree to describe the sequences. Blast Names are informal high level taxonomic categories. The color of the terminal node indicates the Blast Name of a sequence.
  Help:Max Seq Difference
Fraction of mismatching letters in the tree.This value is known as the "difference" and is used to calculate the "distance"between any two sequences in the alignment.The current method used to calculate a distance allows at most a maximum difference of 0.75.To see sequences not used in constructing the tree use the "Show removed sequences" link.

rectangle  slanted  radial  force  Mouse over an internal node for a subtree or alignment Gallus gallus DNA polymerase gamma mRNA, nuclear gene encoding mitochondrial protein, partial cdsGallus gallus homeobox protein (GH6) mRNA, complete cdsPREDICTED: Gallus gallus similar to DNA polymerase gamma (LOC770992), mRNAPREDICTED: Bos taurus similar to DNA polymerase gamma (LOC533090), mRNAPREDICTED: Macaca mulatta polymerase (DNA directed), gamma (POLG), mRNAHomo sapiens polymerase (DNA directed), gamma (POLG) gene, complete cdsPREDICTED: Pan troglodytes polymerase (DNA directed), gamma (POLG), mRNAHomo sapiens polymerase (DNA directed), gamma, mRNA (cDNA clone MGC:21267 IMAGE:4384475), complete cdsHomo sapiens polymerase (DNA directed), gamma (POLG), mRNAHomo sapiens polymerase (DNA directed), gamma, mRNA (cDNA clone MGC:57709 IMAGE:6042595), complete cdsHuman DNA polymerase gamma mRNA, nuclear gene encoding mitochondrial protein, complete cdsHomo sapiens mRNA for mitochondrial DNA polymerase gamma, complete cdsHomo sapiens cDNA FLJ27114 fis, clone SPL05987, highly similar to DNA polymerase gamma (EC 2.7.7.7)Homo sapiens chromosome 15, clone RP11-217B1, complete sequenceHomo sapiens chromosome 15q26.1 clone PAC pDJ457j11 containing DNA polymerase gamma (polg) gene, complete sequenceHuman Chromosome 15q26.1 PAC clone pDJ10k5 containing human DNA polymerase gamma (polg) gene, complete sequencePREDICTED: Canis familiaris similar to DNA polymerase gamma subunit 1 (Mitochondrial DNA polymerase catalytic subunit) (PolG-alpha) (LOC488732), mRNARattus norvegicus mRNA for DNA polymerase gamma (MIP1 gene)Rattus norvegicus polymerase (DNA directed), gamma (Polg), mRNAMus musculus mitochondrial DNA polymerase gamma (Polg) gene, exons 16, 17, and 18; nuclear gene for mitochondrial productMus musculus mitochondrial DNA polymerase gamma (Polg) gene, exons 19 through 23 and complete cds; nuclear gene for mitochondrial productMus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430069H22 product:polymerase (DNA directed), gamma, full insert sequenceMus musculus polymerase (DNA directed), gamma, mRNA (cDNA clone MGC:69606 IMAGE:6827238), complete cdsMus musculus polymerase (DNA directed), gamma (Polg), mRNAMus musculus chromosome 7, clone RP24-186G5, complete sequenceMus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330409N10 product:polymerase (DNA directed), gamma, full insert sequenceMus musculus cDNA clone IMAGE:5721109, containing frame-shift errorsMus musculus PolgA(query)Mus musculus DNA polymerase gamma mRNA, nuclear gene encoding mitochondrial protein, complete cdsMus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370014F07 product:polymerase (DNA directed), gamma, full insert sequenceMus musculus cDNA clone IMAGE:6821261Mus musculus cDNA clone IMAGE:40110975Mus musculus Pol gamma mRNA for mitochondrial DNA polymerase catalytic subunit, complete cds
Blast names color map
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    primates
    mammals
    birds