spacer

ClustalW Results


Results of search
Number of sequences 9
Alignment score 993730
Sequence format Pearson
Sequence type nt
ClustalW version 1.83
JalView
Output file clustalw-20070603-19432689.output
Alignment file clustalw-20070603-19432689.aln
Guide tree file clustalw-20070603-19432689.dnd
Your input file clustalw-20070603-19432689.input

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Scores Table

SeqA Name                Len(nt)  SeqB Name                Len(nt)  Score
=========================================================================
1    M.musculus_Polg__   4596     2    M.musculus          4523     99   
1    M.musculus_Polg__   4596     3    R.norvegicus        3651     94   
1    M.musculus_Polg__   4596     4    Macaca              4419     84   
1    M.musculus_Polg__   4596     5    H.sapiens           4320     84   
1    M.musculus_Polg__   4596     6    Human               4465     83   
1    M.musculus_Polg__   4596     7    Human'              4263     84   
1    M.musculus_Polg__   4596     8    Pan                 4226     84   
1    M.musculus_Polg__   4596     9    Bos                 3975     83   
2    M.musculus          4523     3    R.norvegicus        3651     94   
2    M.musculus          4523     4    Macaca              4419     83   
2    M.musculus          4523     5    H.sapiens           4320     84   
2    M.musculus          4523     6    Human               4465     83   
2    M.musculus          4523     7    Human'              4263     84   
2    M.musculus          4523     8    Pan                 4226     83   
2    M.musculus          4523     9    Bos                 3975     83   
3    R.norvegicus        3651     4    Macaca              4419     87   
3    R.norvegicus        3651     5    H.sapiens           4320     87   
3    R.norvegicus        3651     6    Human               4465     87   
3    R.norvegicus        3651     7    Human'              4263     87   
3    R.norvegicus        3651     8    Pan                 4226     87   
3    R.norvegicus        3651     9    Bos                 3975     85   
4    Macaca              4419     5    H.sapiens           4320     96   
4    Macaca              4419     6    Human               4465     97   
4    Macaca              4419     7    Human'              4263     96   
4    Macaca              4419     8    Pan                 4226     95   
4    Macaca              4419     9    Bos                 3975     88   
5    H.sapiens           4320     6    Human               4465     99   
5    H.sapiens           4320     7    Human'              4263     99   
5    H.sapiens           4320     8    Pan                 4226     95   
5    H.sapiens           4320     9    Bos                 3975     85   
6    Human               4465     7    Human'              4263     99   
6    Human               4465     8    Pan                 4226     98   
6    Human               4465     9    Bos                 3975     88   
7    Human'              4263     8    Pan                 4226     94   
7    Human'              4263     9    Bos                 3975     84   
8    Pan                 4226     9    Bos                 3975     88   
=========================================================================
PLEASE NOTE: Some scores may be missing from the above table if the alignment was done using multiple CPU mode. Please check the output.




Alignment

CLUSTAL W (1.83) multiple sequence alignment


H.sapiens              ------------------------------------------------------------
Human'                 ------------------------------------------------------------
Human                  ------------------------------------------------------------
Macaca                 ------------------------------------------------------------
Pan                    ----------------------------------------------GCTGGGTGCAGACG 14
Bos                    ------------------------------------------------------------
M.musculus_Polg__      ATTGGCGGCGCTCTTATTGGACGCTCGGGGGAGTCTCCCGCCTGCCTCTGGGTAGCCGCG 60
M.musculus             ------------------------------------------------------------
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              ------------------------------------------------------------
Human'                 ------------------------------------------------------------
Human                  ----------------------GCGGACCGGCCGGGTG-GAGGCCACACGCTACCCCGAG 37
Macaca                 ----------------------GCGGACCGGCCGGGTG-GAGGCCACACGCCACCCCGAG 37
Pan                    GGAAGTTGCGGCTGCCAGCGAAGCGGACCGGCCGGGTG-GAGGCCACACGCTACCCCGAG 73
Bos                    GGAAGTTGCCCCTGCCTGTGAGGCGGATCGTTCGGGTG-GAGGCCACAGGCCACCCCGAG 59
M.musculus_Polg__      GGACCCAGTTCGCGCAGACGGGAAGTTGCGGCTGCTCCCGAGACCGCACGCCACCCTGAG 120
M.musculus             -------------------GGGAAGTTGCGGCTGCTCCCGAGACCGCACGCCACCCTGAG 41
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              ------------------------------------------------------------
Human'                 ------------------------------------------------------------
Human                  GCTGCGTAGGCCGCGCGAAGGGGGACGCCGTGCCGTGGGCCTGGGGTCGGGGGAGCAGCA 97
Macaca                 GCTGCGTAGGCCGCGCATAGGGGGACGTCGCGCCGTGGGCCTGGGGTCGGGAGAACCGCA 97
Pan                    GCTGCGTAGGCCGCGCGAAGGGGGACGCCGTGCCGTGGGCCTGGGGTCGGGGGAGCCGCA 133
Bos                    GCTGCACAGGCCGCGCGGAGGGAGCCGGGGCGTCGCCAGCCTGGGTTCGGG--AGCCGCA 117
M.musculus_Polg__      GCTGCGTGGGCCGCGCGCCGCGG-ACGCCGCGTCGTC-GCCGGGGCTGTGGGCTGCCGCA 178
M.musculus             GCTGCGTGGGCCGCGCGCCGCG--ACGCCGCGTCGTC-GCCGGGGCTGTGGGCTGCCGCA 98
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              ------------------------AGGATTTG-GGGTGGAAGGCAGGCATGGTCAA-CCC 34
Human'                 ------------------------------------------------------------
Human                  GACCGGGAAGCACCGTGAGGACCGAGGATTTG-GGGTGGAAGGCAGGCATGGTCAAACCC 156
Macaca                 GACCAGGAAGCACCGTGCGGACCGAGGATTTG-GGGTGGAAGGCAGGCATGGTCAAACCC 156
Pan                    GACCGGGAAGCACC------------GATTTG-GGGTGGAAGGCAGGCATGGTCAAACCC 180
Bos                    GACCAGAAGGCACCGGGCGGACTGAGGATTTGTGGGTGGAAGGCAGGCATGGTCAGAACC 177
M.musculus_Polg__      GAACGGGAAGCGCGAAGCGGACCGAGGACTTGTGTGAGGAAGGCAGGCATGGTGAGACCT 238
M.musculus             GAACGGGAAGCGCGAAGCGGACCGAGGACTTGTGTGAGGAAGGCAGGCATGGTGAGACCT 158
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              ATGTCACTGACAGGAGAGCAGAGAC-AGACGTGTCTCTCTCCACGTCTTCCAGCCAGTAA 93
Human'                 --------------------------GGACGTGTCTCTCTCCACGTCTTCCAGCCAGTAA 34
Human                  ATTTCACTGACAGGAGAGCAGAGACAGGACGTGTCTCTCTCCACGTCTTCCAGCCAGTAA 216
Macaca                 ATTTCACTGACAGGAGAGCAGAGACAGGACGTGTCTCTCTCCGCGTCTTCCAGCCAATAA 216
Pan                    ATTTCACTGACAGGAGAGCAGAGACAGGACGTGTCTCTCTCCACGTCTTCCAGCCAGTAA 240
Bos                    ATTTCCCTGGCAGGAAAGCGGAGACAGGACGTGTCCCTCTCCACGTCTCTCAGCCAGTGA 237
M.musculus_Polg__      ATTTCACTGACAGGAGCACAGAGAGGGGACGCGTCTCTCTCTGAGTCTTTCGGCCACTAA 298
M.musculus             ATTTCACTGACAGGAGCACAGAGAGGGGACGCGTCTCTCTCTGAGTCTTTCGGCCACTAA 218
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              AAGAAGCCAAGCTGGAGCCCAAAGCCAGGTGTTCTGACTCCCAGCGTGGGGGTCCCTGCA 153
Human'                 AAGAAGCCAAGCTGGAGCCCAAAGCCAGGTGTTCTGACTCCCAGCGTGGGGGTCCCTGCA 94
Human                  AAGAAGCCAAGCTGGAGCCCAAAGCCAGGTGTTCTGACTCCCAGCGTGGGGGTCCCTGCA 276
Macaca                 AAGCAGCCAAGCTGGAGTCCAAAGCTAGGTGTTCTGACTCCCAGCGTGGGGGTCCCTGCA 276
Pan                    AAGAAGCCAAGCTGGAGCCCAAAGCCAGGTGTTCTGACTCCCAGCGTGGGGGTCCCTGCA 300
Bos                    ACGCTGCCAAGCTGGAGCCCAAAGCCAGGTGTCCTGACGCCCACCGAGGGGCTCCCTGCA 297
M.musculus_Polg__      AAGCAGTCAAGCTGGAGCCCAAAGCCCGGTGCCCCGACTCACAGCGGGGGGCTCCCTGCA 358
M.musculus             AAGCAGTCAAGCTGGAGCCCAAAGCCCGGTGCCCCGACTCACAGCGGGGGGCTCCCTGCA 278
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              CCAACCATGAGCCGCCTGCTCTGGAGGAAGGTGGCCGGCGCCACCGTCGGGCCAGGGCCG 213
Human'                 CCAACCATGAGCCGCCTGCTCTGGAGGAAGGTGGCCGGCGCCACCGTCGGGCCAGGGCCG 154
Human                  CCAACCATGAGCCGCCTGCTCTGGAGGAAGGTGGCCGGCGCCACCGTCGGGCCAGGGCCG 336
Macaca                 CCAACCATGAGCCGCCTGCTCTGGAGGAAGTTGGCCGGCGCCACCGTCGTGCCAGGGCCG 336
Pan                    CCAACCATGAGCCGCCTGCTCTGGAGGAAGGTGGCCGGCGCCACCGTCGGGCCAGGGCCG 360
Bos                    CCCACCATGAGCCGCCTGCTCTGGAGGAAGGTGGCCGGCGCCACCGTCGGGCCAGGCCCG 357
M.musculus_Polg__      CCAACCATGAGCCGCCTGCTCTGGAAGAAGGTGGCTGGCGCCAAGGTCGCCTCAGGGCCA 418
M.musculus             CCAACCATGAGCCGCCTGCTCTGGAAGAAGGTGGCTGGCGCCAAGGTCGCCTCAGGGCCA 338
R.norvegicus           ------ATGAGCCGCCTGCTCTGGAAGAAGGTGGCCGGCGCCAAAGTCGCCTCAGGGCCA 54
                             ******************* **** **** *******  ****   **** ** 

H.sapiens              GTTCCAGCTCCGGGGCGCTGGGTCTCCAGCTCCGTCCCCGCGTCCGACCCCAGCGACGGG 273
Human'                 GTTCCAGCTCCGGGGCGCTGGGTCTCCAGCTCCGTCCCCGCGTCCGACCCCAGCGACGGG 214
Human                  GTTCCAGCTCCGGGGCGCTGGGTCTCCAGCTCCGTCCCCGCGTCCGACCCCAGCGACGGG 396
Macaca                 GTTCCAGCTCCGGGGCGCTGGGTCTCCAGCTCCGTCCCCGCGTCCGACCCCAGCGACGGG 396
Pan                    GTTCCAGCTCCGGGGCGCTGGGTCTCCAGCTCCGTCCCCGCGTCCGACCCCAGCGACGGG 420
Bos                    GTTCCAGCTCCGCGACGTTGGGTCTCCAGCTCCGCCTCCGACCCCGTCCCCAGCGACGGG 417
M.musculus_Polg__      GTACCAGCAACCGCGCGCTGGGTCTCCAGCTCCGTCCTCGACCCCGTCCCCAGCGACGGG 478
M.musculus             GTACCAGCAACCGAGGGCTGGGTCTCCAGCTCCGTCCTCGCACCCGTCCCCAGCGACGGG 398
R.norvegicus           GTACCAGCAACAGGACGCTGGGTCTCCAGCTCCGTCCTCGACCCCGTCCCCAGCGACGGG 114
                       ** *****  *     * **************** *  **   *** *************

H.sapiens              CAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA------ACAGCAGCCT 327
Human'                 CAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCCT 274
Human                  CAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA------ACAGCAGCCT 450
Macaca                 CGGCGGCGGCAGCAGCAGCAGCTGCAGCAGC----------------------------- 427
Pan                    CAGCGGCGGCGGCAGCAGCAGCAGCAACAGCAGCCTCAGCAGC---------------CT 465
Bos                    CCGCCGTCGCCGCAGCC------------------------------------------- 434
M.musculus_Polg__      CGGCCGCCGTCGCA---------------------------------------------- 492
M.musculus             CGGCCGCCGTCGCA---------------------------------------------- 412
R.norvegicus           CAGCCGCAGTCGCA---------------------------------------------- 128
                       * ** *  *  ***                                              

H.sapiens              CAGCAGCCGCAAGTGCTATCCTCGGAGGGCGGGCAGCTGCGGCACAACCCATTGGACATC 387
Human'                 CAGCAGCCGCAAGTGCTATCCTCGGAGGGCGGGCAGCTGCGGCACAACCCATTGGACATC 334
Human                  CAGCAGCCGCAAGTGCTATCCTCGGAGGGCGGGCAGCTGCGGCACAACCCATTGGACATC 510
Macaca                 -------CGCAAGTGCCATCCTCGGAGGGCGGGCAGCTGCGGCACAACCCGTTGCACATC 480
Pan                    CAGCAGCCGCAAGTGCTATCCTCGGAGGGCGGGCAGCCGCGGCACAACCCATTGGACATC 525
Bos                    -----------AGTGCCATCCTCGGTGGGCGGGCAGCTGCGGCACAACCCCTTGCACATC 483
M.musculus_Polg__      -----------AATGCCCTCCTCCGAGAATGGGCAGCTGCGGCTCAACCCTCTGCTCATC 541
M.musculus             -----------AATGCCCTCCTCCGAGAATGGGCAGCTGCGGCTCAACCCTCTGCTCATC 461
R.norvegicus           -----------AATGCCCTCCTCAGAGAATGGGCAGCTGCGGCTCAACCCTCTGCACATC 177
                                  * ***  ***** * *   ******* ***** ******  **  ****

H.sapiens              CAGATGCTCTCGAGAGGGCTGCACGAGCAAATCTTCGGGCAAGGAGGGGAGATGCCTGGC 447
Human'                 CAGATGCTCTCGAGAGGGCTGCACGAGCAAATCTTCGGGCAAGGAGGGGAGATGCCTGGC 394
Human                  CAGATGCTCTCGAGAGGGCTGCACGAGCAAATCTTCGGGCAAGGAGGGGAGATGCCTGGC 570
Macaca                 CAGATGCTCTCGAAAGGGCTGCACGAGCAAATCTTCGGGCAAGGAGGGGAGATACCCGGC 540
Pan                    CAGATGCTCTCGAGAGGGCTGCACGAGCAAATCTTCGGGCAAGGAGGGGAGATGCCTGGC 585
Bos                    CAGATGCTCTCGAGAGGGCTCCACGAGCAGATCTTCGGGCCCGGCGGGGAGAGGCCCGAC 543
M.musculus_Polg__      CAGATGTTGTCGAGAGGCCTGCACGAGCAGATCTTCGGGTGCGGCGGGGAAATGCCCGAC 601
M.musculus             CAGATGTTGTCGAGAGGCCTGCACGAGCAGATCTTCGGGTGCGGCGGGGAAATGCCCGAC 521
R.norvegicus           CAGATGCTGTCGAGAGGCCTGCACGAGCAAATCTTCGGGTGCGGAGGGGACGTGCCCGAC 237
                       ****** * **** *** ** ******** *********   ** *****    ** * *

H.sapiens              GAGGCCGCGGTGCGCCGCAGCGTCGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCA 507
Human'                 GAGGCCGCGGTGCGCCGCAGCGTCGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCA 454
Human                  GAGGCCGCGGTGCGCCGCAGCGTCGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCA 630
Macaca                 GAGGCCGCGGTGCGCCGCAGCGTCGAACACCTGCAGAAGCACGGGCTCTGGGGGCAGCCA 600
Pan                    GAGGCCGCGGTGCGCCGCAGCGTCGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCA 645
Bos                    GAGGCCGCGGTGCGCCGCAGCGTGGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCA 603
M.musculus_Polg__      GAGGCCGCGGTGCAGCGCAGCGTAGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCG 661
M.musculus             GAGGCCGCGGTGCAGCGCAGCGTAGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCG 581
R.norvegicus           GAGGCCGCGGTGCAGCGCAGCATCGAGCACCTACGGAAGCACGGGCTCTGGGGGCAGCCG 297
                       *************  ****** * ** ***** * ************************ 

H.sapiens              GCCGTGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCTACGGGGACAACCTGGAC 567
Human'                 GCCGTGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCTACGGGGACAACCTGGAC 514
Human                  GCCGTGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCTACGGGGACAACCTGGAC 690
Macaca                 GCAGCGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCTACGGGGACAACCTGGAC 660
Pan                    GCCGTGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCTACGGGGACAACCTGGAC 705
Bos                    GCCCCGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCCTCGGGGGCAGCCTGGAC 663
M.musculus_Polg__      GCCACGCCCTTGCCAGACGTGGAGCTGCGCCTGCCCCGGCTCTTCGGGGGCAACCTGGAC 721
M.musculus             GCCACGCCCTTGCCAGACGTGGAGCTGCGCCTGCCCCGGCTCTTCGGGGGCAACCTGGAC 641
R.norvegicus           ACCACGCCCTTGCCAGACGTGCAGCTGCGCCTGCCCCGGCTCTTCGGGGGCAACCTGGAC 357
                        *   ********* ****** ************* *  ***  ***** ** *******

H.sapiens              CAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTTG 627
Human'                 CAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTTG 574
Human                  CAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTTG 750
Macaca                 CAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTCG 720
Pan                    CAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTTG 765
Bos                    CAGCACTTCCGCATCCTGGCGCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTCG 723
M.musculus_Polg__      CAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCTTACTTGGAGGCGGCCGCCTCG 781
M.musculus             CAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCTTACTTGGAGGCGGCCGCCTCG 701
R.norvegicus           CAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTCCCGTACTTGGAGGCGGCCGCCTCG 417
                       ************ ******* ************** ** *** ***********  ** *

H.sapiens              CTGTTGCAGGCCCAGCTGCCCCCGAAGCCCCCGGCTTGGGCCTGGGCGGAGGGCTGGACC 687
Human'                 CTGTTGCAGGCCCAGCTGCCCCCGAAGCCCCCGGCTTGGGCCTGGGCGGAGGGCTGGACC 634
Human                  CTGTTGCAGGCCCAGCTGCCCCCGAAGCCCCCGGCTTGGGCCTGGGCGGAGGGCTGGACC 810
Macaca                 CTGTTGCAGGCCCAGCTGCCCCCGCAGCCCACGGGTTGGGCCTGGGCGGAGGGCTGGACC 780
Pan                    CTGTTGCAGGCCCAGCTGCCCCCGAAGCCCCCGGCTTGGGCCTGGGCGGAGGGCTGGACC 825
Bos                    CTCTTGCAGGCGCAGCTGCCCCCGCGGCCCCCGAGCTGGGCCTGGGCGGAGGGCTGGACC 783
M.musculus_Polg__      TTATTGGAGGCCCAATTGCCCCCCGAGCCCAAGAGCTGGGCCTGGGCGGAGGGCTGGACC 841
M.musculus             TTATTGGAGGCCCAATTGCCCCCCGAGCCCAAGAGCTGGGCTTGGGCGGAGGGCTGGAAC 761
R.norvegicus           TTATCGGAGGCCCAATTGCCCCCCCAGCCCAGGAAGTGGGTCTGGGCGGAGGGCTGGACC 477
                        * * * **** **  *******   ****  *   ****  **************** *

H.sapiens              CGGTACGGCCCCGAGGGGGAGGCCGTACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 747
Human'                 CGGTACGGCCCCGAGGGGGAGGCCGTACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 694
Human                  CGGTACGGCCCCGAGGGGGAGGCCGTACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 870
Macaca                 CGGTACGGCCCCGAGGGGGAGGCCGTACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 840
Pan                    CGGTACGGCCCCGAGGGGGAGGCCGTACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 885
Bos                    CGGTACGGCCCCGCGGGGGAGGCCGAACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 843
M.musculus_Polg__      CGGTACGGCCCCGAGGGGGAGGCCGAACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 901
M.musculus             CGGTACGGCCCCGAGGGGGAGGCCGAACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 821
R.norvegicus           CGGTACGGCCCCGAGGGGGAGGCCGAACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGTG 537
                       ************* *********** **********************************

H.sapiens              TTCGACGTGGAGGTCTGCTTGGCAGAGGGAACTTGCCCCACATTGGCGGTGGCCATATCC 807
Human'                 TTCGACGTGGAGGTCTGCTTGGCAGAGGGAACTTGCCCCACATTGGCGGTGGCCATATCC 754
Human                  TTCGACGTGGAGGTCTGCTTGGCAGAGGGAACTTGCCCCACATTGGCGGTGGCCATATCC 930
Macaca                 TTCGACGTGGAGGTCTGCTTGGCAGAGGGAATTTGCCCCACATTGGCGGTGGCCATATCC 900
Pan                    TTCGACGTGGAGGTCTGCTTGGCAGAGGGAACTTGCCCCACATTGGCGGTGGCCATATCC 945
Bos                    TTCGACGTGGAGGTCTGCTTGGCAGAGGGAACCTGCCCCACGTTGGCGGTGGCCATATCC 903
M.musculus_Polg__      TTCGACGTGGAGGTCTGCTTGGCAGAGGGAACCTGCCCCACTTTGGCGGTGGCCATATCC 961
M.musculus             TTCGACGTGGAGGTCTGCTTGGCAGAGGGAACCTGCCCCACTTTGGCGGTGGCCATATCC 881
R.norvegicus           TTCGACGTGGAGGTCTGCTTGGCAGAGGGAACCTGCCCCACTTTGGCGGTGGCCATATCC 597
                       *******************************  ******** ******************

H.sapiens              CCCTCGGCCTGGTATTCCTGGTGCAGCCAGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 867
Human'                 CCCTCGGCCTGGTATTCCTGGTGCAGCCAGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 814
Human                  CCCTCGGCCTGGTATTCCTGGTGCAGCCAGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 990
Macaca                 CCCTCGGCCTGGTATTCCTGGTGCAGCCGGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 960
Pan                    CCCTCGGCCTGGTATTCCTGGTGCAGCCAGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 1005
Bos                    CCCTCGGCCTGGTATTCCTGGTGCAGCCGGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 963
M.musculus_Polg__      CCCTCGGCCTGGTATTCCTGGTGCAGCCGGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 1021
M.musculus             CCCTCGGCCTGGTATTCCTGGTGCAGCCGGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 941
R.norvegicus           CCCTCGGCCTGGTATTCCTGGTGCAGCCGGCGGCTGGTGGAAGAGCGTTACTCTTGGACC 657
                       **************************** *******************************

H.sapiens              AGCCAGCTGTCGCCGGCTGACCTCATCCCCCTGGAGGTCCCTACTGGTGCCAGCAGCCCC 927
Human'                 AGCCAGCTGTCGCCGGCTGACCTCATCCCCCTGGAGGTCCCTACTGGTGCCAGCAGCCCC 874
Human                  AGCCAGCTGTCGCCGGCTGACCTCATCCCCCTGGAGGTCCCTACTGGTGCCAGCAGCCCC 1050
Macaca                 AGCCAGCTGTCGCCGGCTGACCTCATCCCCCTGGAGGTCCCTGCTGGTGCCAG---CCCC 1017
Pan                    AGCCAGCTGTCGCCGGCTGACCTCATCCCCCTGGAGGTCCCTGCTAGTGCCAGCAGCCCC 1065
Bos                    AGCCAGCTGTCGCCGGCTGACCTCATTCCCCTGGAGGTCCCTGGCAGTGCCGCCAGCCCT 1023
M.musculus_Polg__      AGCCAGCTATCGCCGGCTGACCTAATCCCTTTGGGGGGCTCCACTAGTGCCAGCAGCTCC 1081
M.musculus             AGCCAGCTATCGCCGGCTGACCTAACCCCTTTGGGGGGCTCCACTAGTGCCAGCAGCTCC 1001
R.norvegicus           AGCCAGCTGTCGCCGGCTGACCTAATCCCTTTGGGGGTCTCTGCTAGTGCCAGCAGCTCC 717
                       ******** ************** *  **  *** ** * *     *****     * * 

H.sapiens              ACCCAGAGAGACTGGCAGGAGCAGTTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCT 987
Human'                 ACCCAGAGAGACTGGCAGGAGCAGTTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCT 934
Human                  ACCCAGAGAGACTGGCAGGAGCAGTTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCT 1110
Macaca                 ACCCAGAGAGATTGGCAGGAGCAGTTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCT 1077
Pan                    ACCCAGAGAGACTGGCAGGAGCAGTTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCT 1125
Bos                    GCTCAGCGAGACCGGCAGGAGCGGTTAGTGGTGGGGCACAATGTGTCCTTCGACCGAGCC 1083
M.musculus_Polg__      ACCAAGCAGGATGGGCAGGAACAGTTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCC 1141
M.musculus             ACCAAGCAGGATGGGCAGGAACAGTTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCC 1061
R.norvegicus           ACCCAGCAGGATTGGCAGGAACAGTTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCC 777
                        *  **   **  ******* * ********************* ***** ******** 

H.sapiens              CATATCAGGGAGCAGTACCTGATCCAGGGTTCCCGCATGCGTTTCCTGGACACCATGAGC 1047
Human'                 CATATCAGGGAGCAGTACCTGATCCAGGGTTCCCGCATGCGTTTCCTGGACACCATGAGC 994
Human                  CATATCAGGGAGCAGTACCTGATCCAGGGTTCCCGCATGCGTTTCCTGGACACCATGAGC 1170
Macaca                 CATATCAGGGAGCAGTACCTGATCCAGGGTTCCCACATGCGTTTCCTGGACACCATGAGC 1137
Pan                    CATATCAGGGAGCAGTACCTGATCCAGGGTTCCCGCATGCGTTTCCTGGACACCATGAGC 1185
Bos                    CACATCCGGGAGCAGTACCTGATCCAGGGTTCCCACATGCGCTTCCTGGACACCATGAGC 1143
M.musculus_Polg__      CATATCAGGGAACAGTATCTGATTCAGGACTCCCGGATGCGTTTTCTCGATACTATGAGC 1201
M.musculus             CATATCAGGGAACAGTATCTGATTCAGGACTCCCGGATGCGTTTTCTCGATACTATGAGC 1121
R.norvegicus           CATATCAGGGAGCAGTATCTGATTCAGGGCTCACGCATGCGCTTTCTGGACACTATGAGC 837
                       ** *** **** ***** ***** ****  ** *  ***** ** ** ** ** ******

H.sapiens              ATGCACATGGCCATCTCAGGGCTAAGCAGCTTCCAGCGCAGTCTGTGGATAGCAGCCAAG 1107
Human'                 ATGCACATGGCCATCTCAGGGCTAAGCAGCTTCCAGCGCAGTCTGTGGATAGCAGCCAAG 1054
Human                  ATGCACATGGCCATCTCAGGGCTAAGCAGCTTCCAGCGCAGTCTGTGGATAGCAGCCAAG 1230
Macaca                 ATGCACATGGCCATCTCAGGGCTAAGTAGCTTCCAGCGCAGTCTGTGGATAGCAGCCAAG 1197
Pan                    ATGCACATGGCCATCTCAGGGCTAAGCAGCTTCCAGCGCAGTCTGTGGATAGCAGCCAAG 1245
Bos                    ATGCACATGGCCATCTCGGGGCTGAGCAGCTTCCAGCGCAGTCTGTGGATGGCTGCCAAG 1203
M.musculus_Polg__      ATGCACATGGCCATCTCGGGGCTGAGCAGCTTCCAGCGCAGCCTGTGGATGGGAGCCAAG 1261
M.musculus             ATGCACATGGCCATCTCGGGGCTGAGCAGCTTCCAGCGCAGCCTGTGGATGGGAGCCAAG 1181
R.norvegicus           ATGCACATGGCTATCTCAGGGCTGAGCAGCTTCCAGCGCAGTCTGTGGATGGGAGCCAAG 897
                       *********** ***** ***** ** ************** ******** *  ******

H.sapiens              CAGGGCAAACA-CAAGGTCCAGCCCCCCACAAAGCAAGGCCAGAAGTCCCAGAGGAAAGC 1166
Human'                 CAGGGCAAACA-CAAGGTCCAGCCCCCCACAAAACAAGGCCAGAAGTCCCAGAGGAAAGC 1113
Human                  CAGGGCAAACA-CAAGGTCCAGCCCCCCACAAAGCAAGGCCAGAAGTCCCAGAGGAAAGC 1289
Macaca                 CAGGGCAAGCA-CAAGGTCCAGGGCTCCACAAAGCAAGGCCAGAAGTCCCAGAGGAAAGC 1256
Pan                    CAGGGCAAGCA-CAAGGTCCAGCCCTCCACAAAGCAAGGCCAGAAGTCCCAGAGGAAAGC 1304
Bos                    CAGGGCAAGCA-CAAGGCCCGGCCCCCTACTCAACGAGGCCAGAAGTCCCAGAGCAAAGC 1262
M.musculus_Polg__      CAGGGAAAGCA-CAAGACCCAGCAGTCCACAAAGCGAGGGCAGAAGTCCCCGAGGAAAGC 1320
M.musculus             CAGGGAAAGCAACAAGACCCAGCAGTCCACAAAGCGAGGGCAGAAGTCCCCGAGGAAAGC 1241
R.norvegicus           CAGGGCAAGCA-CAAGACCCAGCATCCTACAAAGCGAGGTCAGAAGTCCCAGAAGAATGC 956
                       ***** ** ** ****  ** *    * **  * * *** ********** **  ** **

H.sapiens              CAGAAGAGGCCCAGCGATCTCATCCTGGGACTGGCTGGACATCAGCAGTGTCAACAGTCT 1226
Human'                 CAGAAGAGGCCCAGCGATCTCATCCTGGGACTGGCTGGACATCAGCAGTGTCAACAGTCT 1173
Human                  CAGAAGAGGCCCAGCGATCTCATCCTGGGACTGGCTGGACATCAGCAGTGTCAACAGTCT 1349
Macaca                 CCGAAGAGGCCCAGCGATCTCATCCTGGGACTGGCTGGACATCAGCAGTGTCAACAGTCT 1316
Pan                    CAGAAGAGGCCCAGCGATCTCATCCTGGGACTGGCTGGACATCAGCAGTGTCAACAGTCT 1364
Bos                    C---AACGGCCCACCGATCTCGTCCTGGGACTGGCTGGACATCAGTAGTGTCAATAACCT 1319
M.musculus_Polg__      C---AATGGTCCAGCGATCTCATCTTGGGACTGGATGGATATCAGCAGTGCCAATAATCT 1377
M.musculus             C---AATGGTCCAGCGAT-TCATCTTGGGACTGGATGGATATCAGCAGTGCCAATAATCT 1297
R.norvegicus           G---AATGGTCCAGCGATTTCATCTTGGGACTGGATGGACATCAGCAGTGCTAATAATCT 1013
                           *  ** *** **** ** ** ********* **** ***** ****  ** *  **

H.sapiens              GGCAGAGGTGCACAGACTTTATGTAGGGGGGCCTCCCTTAGAGAAGGAGCCTCGAGAACT 1286
Human'                 GGCAGAGGTGCACAGACTTTATGTAGGGGGGCCTCCCTTAGAGAAGGAGCCTCGAGAACT 1233
Human                  GGCAGAGGTGCACAGACTTTATGTAGGGGGGCCTCCCTTAGAGAAGGAGCCTCGAGAACT 1409
Macaca                 GGCAGAGGTGCACAGACTTTATGTAGGGGGGCCTCCCTTAGAGAAGGAGCCTCGAGAACT 1376
Pan                    GGCAGAGGTGCACAGACTTTATGTAGGGGGGCCTCCCTTAGAGAAGGAGCCTCGAGAACT 1424
Bos                    GGCAGACGTGCACGGCCTCTACGTGGGGGGGCCTCGCCTGGAGAAGGAGCCCCGCGAGCT 1379
M.musculus_Polg__      TGCAGATGTGCACAACCTTTATGTGGGGGGACCTCCCTTAGAGAAGGAGCCTCGGGAGCT 1437
M.musculus             TGCAGATGTGCACAACCTTTATGTGGGGGGACCTCCCTTAGAGAAGGAGCCTCGGGAGCT 1357
R.norvegicus           TGCAGACGTGCACAACCTTTATGTGGGGGGACCTCGCTTAGCGAAGGAGCCTCGGGAACT 1073
                        ***** ******   ** ** ** ***** **** * * * ********* ** ** **

H.sapiens              GTTTGTGAAGGGCACCATGAAGGACATTCGTGAGAACTTCCAGGACCTGATGCAGTACTG 1346
Human'                 GTTTGTGAAGGGCACCATGAAGGACATTCGTGAGAACTTCCAGGACCTGATGCAGTACTG 1293
Human                  GTTTGTGAAGGGCACCATGAAGGACATTCGTGAGAACTTCCAGGACCTGATGCAGTACTG 1469
Macaca                 GTTCGTGAAGGGTACCATGAAGGACATTCGTGAGAACTTCCAGGACCTGATGCAGTACTG 1436
Pan                    GTTTGTGAAGGGCACCATGAAGGACATTCGTGAGAACTTCCAGGACCTGATGCAGTACTG 1484
Bos                    GTTTGTCAAGGGCAACATGAAGGACATCCGTGAGAACTTCCAGGACCTGATGCAGTACTG 1439
M.musculus_Polg__      GTTCGTCAAAGGCAGCATGAGGGATATCCGAGAGAACTTCCAGGATCTGATGCAGTACTG 1497
M.musculus             GTTCGTCAAAGGCAGCATGAGGGATATCCGAGAGAACTTCCAGGATCTGATGCAGTACTG 1417
R.norvegicus           GTTCGTCAAAGGCAGCATGAGGGATATCAGGGAGAACTTCCAGGATCTGATGGAGTACTG 1133
                       *** ** ** ** * ***** *** **  * ************** ****** *******

H.sapiens              TGCCCAGGACGTGTGGGCCACCCATGAGGTTTTCCAGCAGCAGCTACCGCTCTTCTTGGA 1406
Human'                 TGCCCAGGACGTGTGGGCCACCCATGAGGTTTTCCAGCAGCAGCTACCGCTCTTCTTGGA 1353
Human                  TGCCCAGGACGTGTGGGCCACCCATGAGGTTTTCCAGCAGCAGCTACCGCTCTTCTTGGA 1529
Macaca                 TGCCCAGGACGTGTGGGCCACCCATGAGGTTTTCCAGCAGCAGCTACCGCTCTTCTTGGA 1496
Pan                    TGCCCAGGACGTGTGGGCCACCCATGAGGTTTTCCAGCAGCAGCTACCGCTCTTCTTGGA 1544
Bos                    TGCCCAGGACGCGTGGGCCACCTATGAGGTTTTCCAGCAGCAGCTTCCACTCTTCCTGGA 1499
M.musculus_Polg__      CGCCCGTGATGTGTGGGCCACCTTTGAGGTTTTCCAGCAGCAGCTGCCACTCTTCTTGGA 1557
M.musculus             CGCCCGTGATGTGTGGGCCACCTTTGAGGTTTTCCAGCAGCAGCTGCCACTCTTCTTGGA 1477
R.norvegicus           TGCTCGTGATGTGTGGGCCACCTTTGAGGTTTTCCAGCAGCAGCTGCCGCTCTTCTTGGA 1193
                        ** *  ** * **********  ********************* ** ****** ****

H.sapiens              GAGGTGTCCCCACCCAGTGACTCTGGCCGGCATGCTGGAGATGGGTGTCTCCTACCTGCC 1466
Human'                 GAGGTGTCCCCACCCAGTGACTCTGGCCGGCATGCTGGAGATGGGTGTCTCCTACCTGCC 1413
Human                  GAGGTGTCCCCACCCAGTGACTCTGGCCGGCATGCTGGAGATGGGTGTCTCCTACCTGCC 1589
Macaca                 GAGGTGTCCCCACCCAGTGACTCTGGCTGGCATGCTGGAGATGGGTGTCTCCTACCTGCC 1556
Pan                    GAGGTGTCCCCACCCAGTGACTCTGGCCGGCATGCTGGAGATGGGTGTCTCCTACCTGCC 1604
Bos                    GAGGTGTCCCCACCCGGTGACTCTGGCTGGCATGTTGGAGATGGGTGTCTCCTACCTGCC 1559
M.musculus_Polg__      GAGGTGTCCCCACCCAGTGACTCTGGCTGGCATGCTGGAGATGGGTGTGTCCTACCTGCC 1617
M.musculus             GAGGTGTCCCCACCCAGTGACTCTGGCTGGCATGCTGGAGATGGGTGTGTCCTACCTGCC 1537
R.norvegicus           GAGGTGTCCCCACCCAGTGACTCTGGCTGGCATGCTGGAGATGGGTGTCTCCTACCTGCC 1253
                       *************** *********** ****** ************* ***********

H.sapiens              TGTCAACCAGAACTGGGAGCGTTACCTGGCAGAGGCACAGGGCACTTATGAGGAGCTCCA 1526
Human'                 TGTCAACCAGAACTGGGAGCGTTACCTGGCAGAGGCACAGGGCACTTATGAGGAGCTCCA 1473
Human                  TGTCAACCAGAACTGGGAGCGTTACCTGGCAGAGGCACAGGGCACTTATGAGGAGCTCCA 1649
Macaca                 TGTCAACCAGAACTGGGAGCGTTACCTGGCAGAGGCACAGGGCACTTATGAGGAGCTCCA 1616
Pan                    TGTCAACCAGAACTGGGAGCGTTACCTGGCAGAGGCACAGGGCACTTATGAGGAGCTCCA 1664
Bos                    CGTCAACCAGAACTGGGAGCGTTACCTGGCGGAGGCCCAGGGCACCTACGAGGAGCTCCA 1619
M.musculus_Polg__      TGTCAACCAGAACTGGGAGCGTTACCTGACAGAGGCACAGAACACATATGAGGAGCTCCA 1677
M.musculus             TGTCAACCAGAACTGGGAGCGTTACCTGACAGAGGCACAGAACACATATGAGGAGCTCCA 1597
R.norvegicus           TGTCAACCAGAACTGGGAGCGGTACCTGACAGAGGCACAGAGCACATATGAGGAACTCCA 1313
                        ******************** ****** * ***** ***  *** ** ***** *****

H.sapiens              GCGGGA-GATGAAGAAGTCGTTGATGGATCTGGCCAATGATGCCTG-CCAGCTGCTCTCA 1584
Human'                 GCGGGA-GATGAAGAAGTCGTTGATGGATCTGGCCAATGATGCCTG-CCAGCTGCTCTCA 1531
Human                  GCGGGA-GATGAAGAAGTCGTTGATGGATCTGGCCAATGATGCCTG-CCAGCTGCTCTCA 1707
Macaca                 GCGGGA-GATGAAGAAGTCGTTGATGGACCTGGCCAACGACGCCTG-CCAGCTGCTCTCA 1674
Pan                    GCGGGA-GATGAAGAAGTCGTTGATGGATCTGGCCAATGATGCCTG-CCAGCTGCTCTCA 1722
Bos                    GCGGGA-GATGAAGAAGTCGCTGATGGACCTGGCCAACGACGCCTG-CCAGTTGCTCTCG 1677
M.musculus_Polg__      GCGGGA-GATGAAGAAGTCGCTGATGGATCTGGCTAATGATGCCTG-TCAGTTGCTCTCA 1735
M.musculus             GCGGGACGATGAAGAAGTCGTTGTAG--TCTGGCTAATGATGCCTGGTCAGTTGCTCTCA 1655
R.norvegicus           GCGGGA-GATGAAGAAGTCGCTGATGGAGCTGGCTAATGATGCCTG-CCAGTTGCTCTCA 1371
                       ****** ************* **  *   ***** ** ** *****  *** ******* 

H.sapiens              GGAGAGAGGTACAAAGAAGACCCCTGGCTCTGGGACCTGGAGTGGGACCTGCAAGAATTT 1644
Human'                 GGAGAGAGGTACAAAGAAGACCCCTGGCTCTGGGACCTGGAGTGGGACCTGCAAGAATTT 1591
Human                  GGAGAGAGGTACAAAGAAGACCCCTGGCTCTGGGACCTGGAGTGGGACCTGCAAGAATTT 1767
Macaca                 GGAGAGAGGTACAAAGAAGACCCCTGGCTCTGGGACCTGGAGTGGGACCTGCAAGAATTT 1734
Pan                    GGAGAGAGGTACAAAGACGACCCCTGGCTCTGGGACCTGGAGTGGGACCTGCAAGAATTT 1782
Bos                    GGAGAGAGGTACAAAGAGGACCCCTGGCTCTGGGACCTGGAGTGGGACGTGCAGGAGTTC 1737
M.musculus_Polg__      GGAGAGAGGTACAAAGAAGACCCTTGGCTCTGGGACCTAGAATGGGATTTGCAGGAGTTT 1795
M.musculus             GGAGAGAGGTACAAAGAAGACCCTTGGCTCTGGGACCTAGAATGGGATTTGCAGGAGTTT 1715
R.norvegicus           GGAGAGAGGTACAAAGAAGACCCTTGGCTCTGGGACCTAGAATGGGACTTGCAGGAATTT 1431
                       ***************** ***** ************** ** *****  **** ** ** 

H.sapiens              AAGCAGAAGAAAGCTAAGAAGGTGAAGAAG---GAACCAGCCACAGCCAGCAAGTTGCCC 1701
Human'                 AAGCAGAAGAAAGCTAAGAAGGTGAAGAAG---GAACCAGCCACAGCCAGCAAGTTGCCC 1648
Human                  AAGCAGAAGAAAGCTAAGAAGGTGAAGAAG---GAACCAGCCACAGCCAGCAAGTTGCCC 1824
Macaca                 AAGCAGAAGAAAGCTAAGAAGGTGAAGAAG---GAGCCAGCCACAGCCAGCAAGTTGCCC 1791
Pan                    AAGCAGAAGAAAGCTAGGAAGGTGAAGAAG---GAACCAGCCACAGCCAGCAAGTTGCCC 1839
Bos                    AAGCAGAAGAAGGCGAAGAAAGGGAAGAGGAGGGAGCCGGCTGCAGCCAGCAAGTTGCCT 1797
M.musculus_Polg__      AAGCAGAAAAAGGCAAAGAAGGTGAAGAAG------CCAGCCTCAGCCAGCAAGTTGCCC 1849
M.musculus             AAGCAGAAAAAGGCAAAGAAGGTGAAGAAG------CCAGCCTCAGCCAGCAAGTTGCCC 1769
R.norvegicus           AAGCAGAAAAAGGCAAAGAAGGTGAAGAAG------ACAGCCTCAGCCAGCAAGTTGCCC 1485
                       ******** ** ** * *** * ***** *       * **  **************** 

H.sapiens              ATCGAGGGGGCTGGGGCCCCTGGTGATCCCATGGATCAGGAAGACCTCGGCCCCTGCAGT 1761
Human'                 ATCGAGGGGGCTGGGGCCCCTGGTGATCCCATGGATCAGGAAGACCTCGGCCCCTGCAGT 1708
Human                  ATCGAGGGGGCTGGGGCCCCTGGTGATCCCATGGATCAGGAAGACCTCGGCCCCTGCAGT 1884
Macaca                 ATCGATGGGGCTGGGGCCCCTGGTGATCCCATGGATCAGGAAGACCTCGGCCCCCGCAGT 1851
Pan                    ATCGAGGGGGCTGGGGCCCCTGGTGATCCCATGGATCAGGAAGACCTCGGCCCCTGCAGT 1899
Bos                    GTCGAGGGGGCTGACGCCCCTGGGGACCCCAGGGATCAGGAAGACCCCGGCCCCCCCAGT 1857
M.musculus_Polg__      ATCGAGGGAGCTGGGCCCTTTGGGGATCCCATGGATCAGGAAGATCCTGGCCCGCCCAGC 1909
M.musculus             ATCGAGGGAGCTGGGCCCTTTGGGGATCCCATGGATCAGGAAGATCCTGGCCCGCCCAGC 1829
R.norvegicus           ATCGAGGGAGCTGGGCCCTTTGGGGATCCCATGGATCAGGAAGATCCTGGACCACCCAGT 1545
                        **** ** ****   **  *** ** **** ************ *  ** **   *** 

H.sapiens              GAGGAGGAGGAGTTTCAACAAGATGTCATGGCCCGCGCCTGCTTGCAGAAGCTGAAGGGG 1821
Human'                 GAGGAGGAGGAGTTTCAACAAGATGTCATGGCCCGCGCCTGCTTGCAGAAGCTGAAGGGG 1768
Human                  GAGGAGGAGGAGTTTCAACAAGATGTCATGGCCCGCGCCTGCTTGCAGAAGCTGAAGGGG 1944
Macaca                 GAGGAGGAGGAGTTTCAACAAGATGTCATGGCCCGTGCCTGCTTGCAGAAGCTGAAGGGG 1911
Pan                    GAGGAGGAGGAGTTTCAACAAGATGTCATGGCCCGCGCCTGCTTGCAGAAGCTGAAGGGG 1959
Bos                    GAGGAGGAGGAGTTCCAGCGAGATGCCACAGCCCGCACCTGCTTGGAGCAGCTGAGGGGG 1917
M.musculus_Polg__      GAGGAGGAGGAGCTTCAGCGAAGTGTAACAGCCCACAACCGGTTACAGCAGCTGAGGAGC 1969
M.musculus             GAGGAGGAGGAGCTTCAGCGAAGTGTAACAGCCCACAACCGGTTACAGCAGCTGAGGAGC 1889
R.norvegicus           GAGGAGGAGGAGCTTCAGCAAAATATAATGGCCCACACCCGTTTACAGCAGCTGAAGAGC 1605
                       ************ * ** * *  *   *  ****    * * **  ** ****** * * 

H.sapiens              ACCACAGAGCTCCTGCCCAAGCGGCCCCAGCACCTTCCTGGACACCCTGGATGGTACCGG 1881
Human'                 ACCACAGAGCTCCTGCCCAAGCGGCCCCAGCACCTTCCTGGACACCCTGGATGGTACCGG 1828
Human                  ACCACAGAGCTCCTGCCCAAGCGGCCCCAGCACCTTCCTGGACACCCTGGATGGTACCGG 2004
Macaca                 ACCACAGAGCTCCTGCCCAAGCGGCCCCAGCACCTTCCTGGACACCCTGGATGGTACCGG 1971
Pan                    ACCACAGAGCTCCTGCCCAAGCGGCCCCAGCACCTTCCTGGACATCCTGGATGGTACCGG 2019
Bos                    ACCACAGAGCTCCTGCCCAAGCGGCCCCAGCACCTTCCTGGACACCCAGGGTGGTATCGG 1977
M.musculus_Polg__      ACCACGGACCTCCTGCCTAAGCGACCCCAGCACCTTCCAGGACACCCTGGGTGGTACCGG 2029
M.musculus             ACCACGGACCTCCTGCCTAAGCGACCCCAGCACCTTCCAGGACACCCTGGGTGGTACCGG 1949
R.norvegicus           ACCACAGACCTCCTGCCTAAGCGACCCCAACACCTTCCTGGACACCCTGGGTGGTACCGG 1665
                       ***** ** ******** ***** ***** ******** ***** ** ** ***** ***

H.sapiens              AAGCTCTGCCCCCGGCTAGACGACCCTGCATGGACCCCGGGCCCCAGCCTCCTCAGCCTG 1941
Human'                 AAGCTCTGCCCCCGGCTAGACGACCCTGCATGGACCCCGGGCCCCAGCCTCCTCAGCCTG 1888
Human                  AAGCTCTGCCCCCGGCTAGACGACCCTGCATGGACCCCGGGCCCCAGCCTCCTCAGCCTG 2064
Macaca                 AAGCTCTGTCCCCGGCTAGACGACCCCGCATGGACCCCAGGCCCCAGCCTTCTCAGCCTG 2031
Pan                    AAGCTCTGCCCCCGGCTAGACGACCCTGCATGGACCCCGGGCCCCAGCCTCCTCAGCCTG 2079
Bos                    AAGCTGTGTCCCCGGCTCGATGACCCTGAGTGGACCCCTGGCCCCAGTCTCCTCAGCCTC 2037
M.musculus_Polg__      AAGCTCTGCCCTCGACTAGATGACCCTGCCTGGGCTCCCGGCCCCAGCCTCCTCAGCCTG 2089
M.musculus             AAGCTCTGCCCTCGACTAGATGACCCTGCCTGGGCTCCCGGCCCCAGCCTCCTCAGCCTG 2009
R.norvegicus           AAACTCTGCCCTCGGCTAGATGACCCTGCATGGACTCCGGGCCCCAGCCTCCTCAGCCTG 1725
                       ** ** ** ** ** ** ** ***** *  *** * ** ******** ** ******** 

H.sapiens              CAGATGCGGGTCACACCTAAACTCATGGCACTTACCTGGGATGGCTTCCCTCTGCACTAC 2001
Human'                 CAGATGCGGGTCACACCTAAACTCATGGCACTTACCTGGGATGGCTTCCCTCTGCACTAC 1948
Human                  CAGATGCGGGTCACACCTAAACTCATGGCACTTACCTGGGATGGCTTCCCTCTGCACTAC 2124
Macaca                 CAGATGCGGGTCACACCTAAACTCATGGCACTGACCTGGGATGGCTTCCCTCTGCACTAC 2091
Pan                    CAGATGCGGGTCACACCTAAACTCATGGCACTGACCTGGGATGGCTTCCCTCTGCACTAC 2139
Bos                    CAGATGCGGGTCACACCTAAGCTCATGGCGCTGACCTGGGACGGCTTCCCTCTGCACTAC 2097
M.musculus_Polg__      CAAATGCGGGTCACTCCTAAGCTCATGGCACTGACCTGGGATGGTTTTCCTCTACACTAC 2149
M.musculus             CAAATGCGGGTCACTCCTAAGCTCATGGCACTGACCTGGGATGGTTTTCCTCTACACTAC 2069
R.norvegicus           CAAATGCGGGTCACTCCTAAGCTCATGGCACTGACCTGGGATGGTTTTCCTCTACACTAC 1785
                       ** *********** ***** ******** ** ******** ** ** ***** ******

H.sapiens              TCAGAGCGTCATGGCTGGGGCTACTTGGTGCCTGGGCGGCGGGACAACCTGGCCAAGCTG 2061
Human'                 TCAGAGCGTCATGGCTGGGGCTACTTGGTGCCTGGGCGGCGGGACAACCTGGCCAAGCTG 2008
Human                  TCAGAGCGTCATGGCTGGGGCTACTTGGTGCCTGGGCGGCGGGACAACCTGGCCAAGCTG 2184
Macaca                 TCAGAGCGTCATGGCTGGGGCTACCTGGTGCCTGGGCGGCGGGACAACCTGGCCAAGCTC 2151
Pan                    TCAGAGCGTCATGGCTGGGGCTACCTGGTGCCTGGGCGGCGGGACAACCTGGCCAAGCTG 2199
Bos                    TCGGAGCAGCATGGCTGGGGCTACCTGGTGCCCGGGCGGCGGGACAACCTGGCTCAGGTG 2157
M.musculus_Polg__      TCAGACTCTCATGGTTGGGGCTACCTAGTGCCTGGGCGTCGGGATAATCTGACCGAGCCG 2209
M.musculus             TCAGACTCTCATGGTTGGGGCTACCTAGTGCCTGGGCGTCGGGATAATCTGACCGAGCCG 2129
R.norvegicus           TCAGACTCTCATGGTTGGGGCTACCTGGTGCCTGGGCGGCGGGATAATCTGACTGAGCTG 1845
                       ** **    ***** ********* * ***** ***** ***** ** *** *  **   

H.sapiens              CCGACAGGTACCACCCTGGAGTCAGCTGGGGTGGTCTGCCCCTACAGAGCCATCGAGTCC 2121
Human'                 CCGACAGGTACCACCCTGGAGTCAGCTGGGGTGGTCTGCCCCTACAGAGCCATCGAGTCC 2068
Human                  CCGACAGGTACCACCCTGGAGTCAGCTGGGGTGGTCTGCCCCTACAGAGCCATCGAGTCC 2244
Macaca                 CCGACAGGTACCACCCTGGAATCAGCTGGGGTGGTCTGCCCCTACAGAGCCATCGAGTCC 2211
Pan                    CCGACAGGTACCACCCTGGAGTCAGCTGGGGTGGTCTGCCCCTACAGAGCCATCGAGTCC 2259
Bos                    TCGGCCGGCAGTACTCCCACGTCGGCTGGGGCGGCCTGCCCCCACACAGCCATCGAGTCC 2217
M.musculus_Polg__      CCAGTGAGCCCCACTGTAGAATCCGCTGCAGTAACCTGCCCCTACAGAGCCATCGAGTCC 2269
M.musculus             CCAGTGAGCCCCACTGTAGAATCCGCTGCAGTAACCTGCCCCTACAGAGCCATCGAGTCC 2189
R.norvegicus           CCAGTGAGCCCCACTGAGGAGTCAGCTGCGGTGACCTGCCCCTACAGAGCCATCGAGTCC 1905
                        *     *    **       ** ****  *    ******* *** *************

H.sapiens              CTGTACAGGAAGCACTGTCTCGAACAGGGGAAGCAGCAGCTGATGCCCCAGGAGGCCGGC 2181
Human'                 CTGTACAGGAAGCACTGTCTCGAACAGGGGAAGCAGCAGCTGATGCCCCAGGAGGCCGGC 2128
Human                  CTGTACAGGAAGCACTGTCTCGAACAGGGGAAGCAGCAGCTGATGCCCCAGGAGGCCGGC 2304
Macaca                 CTGTACAGGAAGCACTGTCTCGAACAGGGGAAGCAGCAGCTAACGCCTCAGGAGGCCGGC 2271
Pan                    CTGTACAGGAAGCACTGTCTCGAACAGGGGAAGCAGCAGCTGATGCCCCAGGAGGCCGGC 2319
Bos                    CTGTACAGGAAGCACTGTCTTGAACAGGGGAAGCAGCAGCTGGAGCTGCCACAGGCAGAC 2277
M.musculus_Polg__      TTATACAGGAAGCACTGCCTTGAACAGGGGAAGCAGCAATTGGAGCCCCAGGAGGTAGAC 2329
M.musculus             TTATACAGGAAGCACTGCCTTGAACAGGGGAAGCAGCAATTGGAGCCCCAGGAGGTAGAC 2249
R.norvegicus           TTGTACAGGAGGCACTGTCTTGACCAGGGCAAGCAGCAGCTGGAGACCCAGGAGACAGAC 1965
                        * ******* ****** ** ** ***** ********  *   *   *   **   * *

H.sapiens              CTGGCGGAGGAGTTCCTGCTCACTGACAATAGTGCCATATGGCAAACGGTAGAAGAACTG 2241
Human'                 CTGGCGGAGGAGTTCCTGCTCACTGACAATAGTGCCATATGGCAAACGGTAGAAGAACTG 2188
Human                  CTGGCGGAGGAGTTCCTGCTCACTGACAATAGTGCCATATGGCAAACGGTAGAAGAACTG 2364
Macaca                 CTGGCTGAGGAGTTCCTGCTCACTGACAATAGTGCCATATGGCAAACGGTAGAAGAACTG 2331
Pan                    CTGGCCGAGGAGTTCCTGCTCACTGACAATAGTGCCATATGGCAAACGGTAGAAGAACTG 2379
Bos                    CTTTCCGAGGAGTTCCTGCTGTCCGACAGCGGTGCCATGTGGCAGACGGTGGAAGAATTG 2337
M.musculus_Polg__      CTGGCTGAGGAGTTCTTACTCACTGACAGTAGTGCCATGTGGCAAACGGTAGAAGAACTG 2389
M.musculus             CTGGCTGAGGAGTTCTTACTCACTGACAGTAGTGCCATGTGGCAAACGGTAGAAGAACTG 2309
R.norvegicus           CTGGCTGAGGAGTTCTTGCTCACGGACAGT---GCCATGTGGCAGACGGTAGAAGAACTG 2022
                       **  * ********* * **  * ****     ***** ***** ***** ****** **

H.sapiens              GATTACTTAGAAGTGGAGGCTGAGGCCAAGATGGAGAACTTGCGAGCTGCAGTGCCAGGT 2301
Human'                 GATTACTTAGAAGTGGAGGCTGAGGCCAAGATGGAGAACTTGCGAGCTGCAGTGCCAGGT 2248
Human                  GATTACTTAGAAGTGGAGGCTGAGGCCAAGATGGAGAACTTGCGAGCTGCAGTGCCAGGT 2424
Macaca                 GATTACTTAGAAGTGGAGGCTGAGGCCAAGATGGAGAACTTGCGAGCTGCAGTGCCAGGT 2391
Pan                    GATTACTTAGAAGTGGAGGCTGAGGCCAAGATGGAGAACTTGCGAGCTGCAGTGCCAGGT 2439
Bos                    GGCTGCTTGGAAGTGGAGGCCGAGGCAAAGATGGAGAACTTGCAAGAGGCAGTCCCAGGT 2397
M.musculus_Polg__      GGCTGCTTAGACGTAGAGGCTGAGGCCAAGATGGAGAATT---------CAGGGCTGAGC 2440
M.musculus             GGCTGCTTAGACGTAGAGGCTGAGGCCAAGATGGAGAATT---------CAGGGCTGAGC 2360
R.norvegicus           GGCTGCTTAGATGTGGAGGCTGAGGCCACAGTGGAGAGTT---------CAGGGCTGAGT 2073
                       *  * *** ** ** ***** ***** *   ******  *         ***  *   * 

H.sapiens              CAACCCCTAGCTCTGACTGCCCGTGGTGGCCCCAAGGACACCCAGCCCAGCTATCACCAT 2361
Human'                 CAACCCCTAGCTCTGACTGCCCGTGGTGGCCCCAAGGACACCCAGCCCAGCTATCACCAT 2308
Human                  CAACCCCTAGCTCTGACTGCCCGTGGTGGCCCCAAGGACACCCAGCCCAGCTATCACCAT 2484
Macaca                 CAACCGCTAGCTCTGACTGCCCCTGGCGGCCCCAAGGACAGCCAGCCCAACTATCACCAT 2451
Pan                    CAACCCCTAGCTCTGACTGCCCGTGGTGGCCCCAAGGACACCCAGCCCAGCTATCACCAT 2499
Bos                    CAACCGCTAGCTCCGACTGCTGCTGGTGGCCCCAAAGCCAGCCAGCCAGCTTATCACCAT 2457
M.musculus_Polg__      CAACCTCTAGTTCTGCCTGCTGCTTGTGCCCCCAAATCCAGCCAGCCCACGTATCACCAT 2500
M.musculus             CAACCTCTAGTTCTGCCTGCTGCTTGTGCCCCCAAATCCAGCCAGCCCACGTATCACCAT 2420
R.norvegicus           CAGCCCCTAGTTCCGCCTACTGCTTGTGCCCCCAAAACCAGCCAGCCCACTTATCACCAT 2133
                       ** ** **** ** * ** *   * * * ******   ** ******    *********

H.sapiens              GGCAATGGACCTTACAACGACGTGGACATCCCTGGCTGCTGGTTTTTCAAGCTGCCTCAC 2421
Human'                 GGCAATGGACCTTACAACGACGTGGACATCCCTGGCTGCTGGTTTTTCAAGCTGCCTCAC 2368
Human                  GGCAATGGACCTTACAACGACGTGGACATCCCTGGCTGCTGGTTTTTCAAGCTGCCTCAC 2544
Macaca                 GGCAATGGACCTTACAACGATGTGGACATCCCTGGCTGCTGGTTTTTCAAGCTGCCTCAC 2511
Pan                    GGCAATGGACCTTACAACGACGTGGACATCCCTGGCTGCTGGTTTTTCAAGCTGCCTCAC 2559
Bos                    GGCAACGGACCCTACAACGACGTGGATATCCCTGGCTGCTGGTTCTTCAAGCTGCCTCAC 2517
M.musculus_Polg__      GGCAACGGACCTTATAATGATGTGAATATCCCTGGTTGCTGGTTTTTCAAGCTGCCTCAC 2560
M.musculus             GGCAACGGACCTTATAATGATGTGAATATCCCTGGTTGCTGGTTTTTCAAGCTGCCTCAC 2480
R.norvegicus           GGCAACGGACCTTATAATGATGTGGATATCCCCGGTTGCTGGTTTTTCAAGCTGCCTCAC 2193
                       ***** ***** ** ** ** *** * ***** ** ******** ***************

H.sapiens              AAGGATGGTAATAGCTGTAATGTGGGAAGCCCCTTTGCCAAGGACTTCCTGCCCAAGATG 2481
Human'                 AAGGATGGTAATAGCTGTAATGTGGGAAGCCCCTTTGCCAAGGACTTCCTGCCCAAGATG 2428
Human                  AAGGATGGTAATAGCTGTAATGTGGGAAGCCCCTTTGCCAAGGACTTCCTGCCCAAGATG 2604
Macaca                 AAGGATGGTAATAGCTGTAATGTGGGAAGCCCCTTTGCCAAGGACTTCCTGCCCAAGATG 2571
Pan                    AAGGATGGTAATAGCTGTAATGTGGGAAGCCCCTTTGCCAAGGACTTCCTGCCCAAGATG 2619
Bos                    AAGGATGGCAACAGCTGCAATGTGGGCAGCCCCTTCGCCAAAGACTTCCTGCCCAAGATG 2577
M.musculus_Polg__      AAGGACGGTAACAACTACAATGTGGGCAGTCCCTTTGCCAAAGATTTCCTGCCCAAGATG 2620
M.musculus             AAGGACGGTAACAACTACAATGTGGGCAGTCCCTTTGCCAAAGATTTCCTGCCCAAGATG 2540
R.norvegicus           AAGGATGGTAACAACTACAATGTGGGTAGTCCCTTTGCCAAAGATTTCCTGCCCAAGATG 2253
                       ***** ** ** * **  ******** ** ***** ***** ** ***************

H.sapiens              GAGGATGGCACCCTGCAGGCTGGCCCAGGAGGTGCCAGTGGGCCCCGTGCTCTGGAAATC 2541
Human'                 GAGGATGGCACCCTGCAGGCTGGCCCAGGAGGTGCCAGTGGGCCCCGTGCTCTGGAAATC 2488
Human                  GAGGATGGCACCCTGCAGGCTGGCCCAGGAGGTGCCAGTGGGCCCCGTGCTCTGGAAATC 2664
Macaca                 GAGGATGGCACCCTGCAGGCTGGCCCAGGAGGTGCCAGTGGGCCCCGTGCTCTGGAAATC 2631
Pan                    GAGGATGGCACCCTGCAGGCTGGCCCAGGAGGTGCCAGTGGGCCCCGTGCTCTGGAAATC 2679
Bos                    GAGGACGGCAGCCTGCAGGCTGGCCCAGGAGGCGCCAGCGGGCCCCGGGCCTTGGAAATC 2637
M.musculus_Polg__      GAGGATGGCACCCTGCAGGCTGGCCCAGGAGGTGCCAGTGGGCCTCGTGCCCTGGAAATA 2680
M.musculus             GAGGATGGCACCCTGCAGGCTGGCCCAGGAGGTGCCAGTGGGCCTCGTGCCCTGGAAATA 2600
R.norvegicus           GAAGACGGCACTCTGCAGGCTGGCCCAGGGGGTGCCAGGGGACCTCGTGCCCTGGAAATA 2313
                       ** ** ****  ***************** ** ***** ** ** ** **  ******* 

H.sapiens              AACAAAATGATTTCTTTCTGGAGGAACGCCCATAAACGTATCAGCTCCCAGATGGTGGTG 2601
Human'                 AACAAAATGATTTCTTTCTGGAGGAACGCCCATAAACGTATCAGCTCCCAGATGGTGGTG 2548
Human                  AACAAAATGATTTCTTTCTGGAGGAACGCCCATAAACGTATCAGCTCCCAGATGGTGGTG 2724
Macaca                 AACAAAATGATTTCTTTCTGGAGGAACGCCCATAAACGTATCAGCTCCCAGATGGTGGTG 2691
Pan                    AACAAAATGATTTCTTTCTGGAGGAACGCCCATAAACGTATCAGCTCTCAGATGGTGGTG 2739
Bos                    AATAAGATGATCTCATTTTGGAGGAACGCCCATAAGCGTATCAGCTCCCAGATGGTGGTG 2697
M.musculus_Polg__      AATAAAATGATTTCTTTTTGGAGGAATGCTCATAAACGTATCAGTTCCCAGATGGTGGTA 2740
M.musculus             AATAAAATGATTTCTTTTTGGAGGAATGCTCATAAACGTATCAGTTCCCAGATGGTGGTA 2660
R.norvegicus           AATAAAATGATTTCTTTTTGGAGGAATGCTCATAAACGCATCAGCTCCCAGATGGTGGTA 2373
                       ** ** ***** ** ** ******** ** ***** ** ***** ** *********** 

H.sapiens              TGGCTGCCCAGGTCAGCTCTGCCCCGTGCTGTGATCAGGCACCCCGACTATGATGAGGAA 2661
Human'                 TGGCTGCCCAGGTCAGCTCTGCCCCGTGCTGTGATCAGGCACCCCGACTATGATGAGGAA 2608
Human                  TGGCTGCCCAGGTCAGCTCTGCCCCGTGCTGTGATCAGGCACCCCGACTATGATGAGGAA 2784
Macaca                 TGGCTGCCCAGGTCAGCTCTGCCCCGTGCTGTGATCAGGCACCCCGACTATGATGAGGAA 2751
Pan                    TGGCTGCCCAGGTCAGCTCTGCCCCGTGCTGTGATCAGGCACCCCGACTATGATGAGGAA 2799
Bos                    TGGCTGCCCCGGTCTGCGCTGCCCCGGGCCGTGACCAGGCATGCCAACTACGATGAGGAA 2757
M.musculus_Polg__      TGGCTCCCCAGGTCAGCTCTGCCCCGGGTTGTGACCAGGCACCCCAGCTTCGATGAGGAA 2800
M.musculus             TGGCTCCCCAGGTCAGCTCTGCCCCGGGTTGTGACCAGGCACCCAGCTTTCGATGAGGAA 2720
R.norvegicus           TGGCTCCCCAGGTCAGCTCTGCCCCGGGCTGTGACCAGGCACCCCAGCTTTGATGAGGAA 2433
                       ***** *** **** ** ******** *  **** ******  *    *  *********

H.sapiens              GGCCTCTATGGGGCCATCCTGCCCCAAGTGGTGACTGCCGGCACCATCACTCGCCGGGCT 2721
Human'                 GGCCTCTATGGGGCCATCCTGCCCCAAGTGGTGACTGCCGGCACCATCACTCGCCGGGCT 2668
Human                  GGCCTCTATGGGGCCATCCTGCCCCAAGTGGTGACTGCCGGCACCATCACTCGCCGGGCT 2844
Macaca                 GGCCTCTATGGGGCCATCCTGCCCCAAGTGGTGACTGCCGGCACCATCACTCGCCGGGCT 2811
Pan                    GGCCTCTATGGGGCCATCCTGCCCCAAGTGGTGACTGCCGGCACCATTACTCGCCGGGCT 2859
Bos                    GGCCGCTACGGGGCCATCCTGCCCCAGGTGGTGACGGCTGGCACCATCACTCGACGGGCT 2817
M.musculus_Polg__      GGCCACTATGGGGCCATCCTACCCCAGGTGGTGACTGCTGGCACCATCACCCGTCGAGCT 2860
M.musculus             GGCCACTATGGGGCCATCCTACCCCAGGTGGTGACTGCTGGCACCATCACCCGTCGAGCT 2780
R.norvegicus           AGCCACTATGGGGCCATCCTGCCCCAGGTGGTGACTGCTGGCACCATCACCCGTCGCGCT 2493
                        *** *** *********** ***** ******** ** ******** ** ** ** ***

H.sapiens              GTGGAGCCCACATGGCTCACCGCCAGCAATGCCCGGCCTGACCGAGTAGGCAGTGAGTTG 2781
Human'                 GTGGAGCCCACATGGCTCACCGCCAGCAATGCCCGGCCTGACCGAGTAGGCAGTGAGTTG 2728
Human                  GTGGAGCCCACATGGCTCACCGCCAGCAATGCCCGGCCTGACCGAGTAGGCAGTGAGTTG 2904
Macaca                 GTGGAGCCCACGTGGCTCACTGCCAGCAATGCCCGGCCTGACCGAGTAGGCAGTGAGTTG 2871
Pan                    GTGGAGCCCACATGGCTCACCGCCAGCAATGCCCGGCCTGACCGAGTAGGCAGTGAGTTG 2919
Bos                    GTGGAGCCCACATGGCTCACTGCCAGCAATGCCCGGCCTGACCGCGTAGGCAGTGAGTTG 2877
M.musculus_Polg__      GTGGAGCCCACGTGGCTCACTGCCAGTAATGCTCGGCCTGACCGGGTAGGCAGTGAGTTG 2920
M.musculus             GTGGAGCCCACGTGGCTCACTGCCAGTAATGCTCGGCCTGACCGGGTAGGCAGTGAGTTG 2840
R.norvegicus           GTGGAGCCCACGTGGCTCACTGCCAGCAATGCTCGGCCTGACCGGGTAGGCAGTGAGTTG 2553
                       *********** ******** ***** ***** *********** ***************

H.sapiens              AAAGCCATGGTGCAGGCCCCACCTGGCTACACCCTTGTGGGTGCTGATGTGGACTCCCAA 2841
Human'                 AAAGCCATGGTGCAGGCCCCACCTGGCTACACCCTTGTGGGTGCTGATGTGGACTCCCAA 2788
Human                  AAAGCCATGGTGCAGGCCCCACCTGGCTACACCCTTGTGGGTGCTGATGTGGACTCCCAA 2964
Macaca                 AAAGCCATGGTGCAGGCCCCACCTGGCTACACCCTTGTGGGTGCTGATGTGGACTCTCAA 2931
Pan                    AAAGCCATGGTGCAGGCCCCACCTGGCTACACCCTTGTGGGTGCTGATGTGGACTCCCAA 2979
Bos                    AAGGCCATGGTCCAGGCCCCGCCTGGCTACGTCCTCGTGGGTGCCGACGTGGACTCCCAG 2937
M.musculus_Polg__      AAAGCCATGGTGCAGGCTCCACCTGGCTATGTCCTTGTGGGTGCTGATGTGGACTCACAG 2980
M.musculus             AAAGCCATGGTGCAGGCTCCAACTGGCTATGTCCTTGTGGGTGCTGATGTGGACTCACAG 2900
R.norvegicus           AAAGCCATGGTGCAGGCTCCACCTGGCTATGTCCTTGTGGGTGCTGATGTGGACTCACAG 2613
                       ** ******** ***** **  *******   *** ******** ** ******** ** 

H.sapiens              GAGCTGTGGATTGCAGCTGTGCTTGGAGACGCCCACTTTGCCGGCATGCATGGCTGCACA 2901
Human'                 GAGCTGTGGATTGCAGCTGTGCTTGGAGACGCCCACTTTGCCGGCATGCATGGCTGCACA 2848
Human                  GAGCTGTGGATTGCAGCTGTGCTTGGAGACGCCCACTTTGCCGGCATGCATGGCTGCACA 3024
Macaca                 GAGCTGTGGATTGCAGCTGTGCTTGGAGACGCCCACTTTGCCGGCATGCATGGCTGCACA 2991
Pan                    GAGCTGTGGATTGCAGCTGTGCTTGGAGACGCCCACTTTGCCGGCATGCATGGCTGCACA 3039
Bos                    GAGCTGTGGATCGCAGCTGTGCTGGGAGATGCCCACTTTGCCGGCATGCATGGCTGCACA 2997
M.musculus_Polg__      GAACTGTGGATCGCAGCTGTACTTGGAGATGCTCACTTTGCTGGGATGCATGGCTGCACG 3040
M.musculus             GAACTGTGGATCGCAGCTGTACTTGGAGATGCTCACTTAGCTGGGATGCATGGCTGCACG 2960
R.norvegicus           GAACTGTGGATCGCAGCCGTTCTTGGAGATGCTCACTTTGCTGGGATGCATGGCTGCACG 2673
                       ** ******** ***** ** ** ***** ** ***** ** ** ************** 

H.sapiens              GCCTTTGGGTGGATGACACTGCAGGGCAGGAAGAGCAGGGGCACTGATCTACACAGTAAG 2961
Human'                 GCCTTTGGGTGGATGACACTGCAGGGCAGGAAGAGCAGGGGCACTGATCTACACAGTAAG 2908
Human                  GCCTTTGGGTGGATGACACTGCAGGGCAGGAAGAGCAGGGGCACTGATCTACACAGTAAG 3084
Macaca                 GCCTTTGGATGGATGACACTGCAGGGCAGGAAGAGCAGGGGCACTGATCTACACAGTAAG 3051
Pan                    GCCTTTGGGTGGATGACACTGCAGGGCAGGAAGAGCAGGGGCACTGATCTACACAGTAAG 3099
Bos                    GCCTTCGGCTGGATGACCCTGCAGGGCAGGAAGAGCAGGGGCACTGATCTGCACAGCAAG 3057
M.musculus_Polg__      GCCTTTGGCTGGATGACTCTGCAGGGCAGGAAGAGCAGAGGCACTGATCTGCACAGCAAG 3100
M.musculus             GCCTTTGGCTGGATGACTCTGCAGGGCAGGAAGAGCAGAGGCACTGATCTGCACAGCAAG 3020
R.norvegicus           GCCTTTGGCTGGATGACTCTTCAGGGCAGGAAGAGCAGAGGCACTGATCTGCACAGTAAG 2733
                       ***** ** ******** ** ***************** *********** ***** ***

H.sapiens              ACAGCCACTACTGTGGGCATCAGCCGTGAGCATGCCAAAATCTTCAACTACGGCCGCATC 3021
Human'                 ACAGCCACTACTGTGGGCATCAGCCGTGAGCATGCCAAAATCTTCAACTACGGCCGCATC 2968
Human                  ACAGCCACTACTGTGGGCATCAGCCGTGAGCATGCCAAAATCTTCAACTACGGCCGCATC 3144
Macaca                 ACAGCCACTACCGTGGGCATCAGCCGTGAGCATGCCAAAGTCTTCAACTACGGCCGCATC 3111
Pan                    ACAGCCACTACTGTGGGCATCAGCCGTGAGCATGCCAAAATCTTCAACTACGGCCGCATC 3159
Bos                    ACAGCAGCCACCGTGGGCATCAGCCGTGAGCATGCCAAGATCATCAACTACGGCCGCATC 3117
M.musculus_Polg__      ACAGCTGCCACTGTGGGCATCAGCCGAGAGCATGCCAAAATCTTCAACTATGGCCGCATC 3160
M.musculus             ACAGCTGCCACTGTGCGCATCCACCGAGAGCATGCCAAAATCTTCAACTATGGCCGCATC 3080
R.norvegicus           ACAGCCGCCACTGTGGGCATCAGTCGTGAGCACGCCAAAGTCTTCAACTACGGCCGCATC 2793
                       *****  * ** *** *****   ** ***** *****  ** ******* *********

H.sapiens              TATGGTGCTGGGCAGCCCTTTGCTGAGCGCTTACTAATGCAGTTTAACCACCGGCTCACA 3081
Human'                 TATGGTGCTGGGCAGCCCTTTGCTGAGCGCTTACTAATGCAGTTTAACCACCGGCTCACA 3028
Human                  TATGGTGCTGGGCAGCCCTTTGCTGAGCGCTTACTAATGCAGTTTAACCACCGGCTCACA 3204
Macaca                 TATGGGGCTGGGCAGCCCTTTGCTGAGCGCTTACTAATGCAGTTTAACCACCGGCTCACG 3171
Pan                    TATGGTGCTGGGCAGCCCTTTGCTGAGCGCTTACTAATGCAGTTTAACCACCGGCTCACA 3219
Bos                    TATGGGGCCGGGCAGCCCTTCGCCGAGCGCCTGCTCATGCAGTTCAACCACCGACTCACG 3177
M.musculus_Polg__      TATGGGGCTGGGCAGTCCTTTGCTGAGCGCCTACTGATGCAGTTCAACCACAGGCTCACA 3220
M.musculus             TATGGGGCTGGGCAGTCCTTTGCTGAGCGCCTACTGATGCAGTTCAACCACAGGCTCACA 3140
R.norvegicus           TACGGGGCTGGGCAGTCCTTTGCCGAGCGCCTGCTGATGCAGTTCAACCACAGGCTCTCA 2853
                       ** ** ** ****** **** ** ****** * ** ******** ****** * *** * 

H.sapiens              CAGCAGGAGGCAGCTGAGAAGGCCCAGCAGATGTACGCTGCCACCAAGGGCCTCCGCTGG 3141
Human'                 CAGCAGGAGGCAGCTGAGAAGGCCCAGCAGATGTACGCTGCCACCAAGGGCCTCCGCTGG 3088
Human                  CAGCAGGAGGCAGCTGAGAAGGCCCAGCAGATGTACGCTGCCACCAAGGGCCTCCGCTGG 3264
Macaca                 CAGCAGGAGGCAGCTGAGAAGGCCCAGCAGATGTACGCCATCACCAAGGGCCTCCGCTGG 3231
Pan                    CAGCAGGAGGCAGCTGAGAAGGCCCAGCAGATGTACGCTGCCACCAAGGGCCTCCGCTGG 3279
Bos                    CGGCAGGAGGCAGCTGAGAAGGCCCAGCAGATGTATGCGGTCACCAAGGGCCTCCGCCGG 3237
M.musculus_Polg__      AGGCAGGAGGCAGCTGAGAAGGCCCAGCAGATGTATGCAGTCACAAAAGGCCTGCGCCGG 3280
M.musculus             AGGCAGGAGGCAGCTGAGAAGGCCCAGCAGATGTATGCAGTCACAAAAGGCCTGCGCCGG 3200
R.norvegicus           AGGCAGGAGGCAGCTGACAAGGCCCAGCAGATGTACGCTGTCACGAAAGGCCTGCGCCGA 2913
                         *************** ***************** **   *** ** ***** *** * 

H.sapiens              TATCGGCTGTCGGATGAGGGCGAGTGGCTGGTGAGGGAGTTGAACCTCCCAGTGGACAGG 3201
Human'                 TATCGGCTGTCGGATGAGGGCGAGTGGCTGGTGAGGGAGTTGAACCTCCCAGTGGACAGG 3148
Human                  TATCGGCTGTCGGATGAGGGCGAGTGGCTGGTGAGGGAGTTGAACCTCCCAGTGGACAGG 3324
Macaca                 TATCGGCTGTCGGATGAGGGCGAGTGGCTGGTGAGGGAGTTGCACCTCCCAGTGGACAGG 3291
Pan                    TATCGGCTGTCGGATGAGGGCGAGTGGCTGGTGAGGGAGTTGAACCTCCCAGTGGACAGG 3339
Bos                    TACCGGTTGTCAGATGAGGGCGAGTGGCTGGTGAAGGAGTTGGACCTCCCTGTGGAGAGG 3297
M.musculus_Polg__      TATCGGCTGTCTGCGGATGGTGAGTGGCTGGTGAAACAGTTGAATCTTCCTGTGGACAGG 3340
M.musculus             TATCGGCTGTCTGCGGATGGTGAGTGGCTGGTGAAACAGTTGAATCTTCCTGTGGACAGG 3260
R.norvegicus           TACCGGCTCTCAGATGATGGTGAATGGCTGGTGAAACAGTTAAATGTTCCTGTGGACAGG 2973
                       ** *** * ** *  ** ** ** **********   ****  *  * ** ***** ***

H.sapiens              ACTGAGGGTGGCTGGATTTCCCTGCAGGATCTGCGCAAGGTCCAGAGAGAAACTGCAAGG 3261
Human'                 ACTGAGGGTGGCTGGATTTCCCTGCAGGATCTGCGCAAGGTCCAGAGAGAAACTGCAAGG 3208
Human                  ACTGAGGGTGGCTGGATTTCCCTGCAGGATCTGCGCAAGGTCCAGAGAGAAACTGCAAGG 3384
Macaca                 ACTGAGGGTGGCTGGATTTCCCTGCAGGATCTGCGCAAGGTCCAGAGAGAAGCTGCAAGA 3351
Pan                    ACTGAGGGTGGCTGGATTTCCCTGCAGGATCTGCGCAAGGTCCAGAGAGAAACTGCCAGG 3399
Bos                    ACCGAGGACGGCTGGGTTTCCCTGAAGGATCTGCGCAAGATCCAGAGAGAAGCTTCAAAG 3357
M.musculus_Polg__      ACAGAGGACGGCTGGGTCTCCCTACAAGATCTTCGAATGATCCGAAGAGAAGCTTCAAGG 3400
M.musculus             ACAGAGGACGGCTGGGTCTCCCTACAAGATCTTCGAATGATCCGAAGAGAAGCTTCAAGG 3320
R.norvegicus           ACAGAAGACGGCTGGGTTTCCCTACAAGATCTTCGAAAGATCCGAAGAGAAGCTTCAAGG 3033
                       ** ** *  ****** * *****  * ***** ** * * ***  ****** ** * *  

H.sapiens              AAGTCACAGTGGAAGAAGTGGGAGGTGGTTGCTGAACGGGCATGGAAGGGGGGCACAGAG 3321
Human'                 AAGTCACAGTGGAAGAAGTGGGAGGTGGTTGCTGAACGGGCATGGAAGGGGGGCACAGAG 3268
Human                  AAGTCACAGTGGAAGAAGTGGGAGGTGGTTGCTGAACGGGCATGGAAGGGGGGCACAGAG 3444
Macaca                 AAGTCACACCGGAAGAAGTGGGAGGTGATTGCTGAACGGGCATGGAAGGGGGGCACAGAG 3411
Pan                    AAGTCACAGTGGAAGAAGTGGGAGGTGGTTGCTGAACGGGCATGGAAGGGGGGCACAGAG 3459
Bos                    AAATCGCGATGGAAGAAGTGGGAGGTGGTTGCTCAGCGAGCCTGGATGGGGGGCACAGAG 3417
M.musculus_Polg__      AAGTCACGATGGAAGAAGTGGGAGGTAGCCTCTGAACGAGCATGGACAGGGGGCACAGAG 3460
M.musculus             AAGTCACGATGGAAGAAGTGGGAGGTAGCCTCTGAACGAGCATGGACAGGGGGCACAGAG 3380
R.norvegicus           AAGTCTCGATGGAAGAAGTGGGAGGTAGTCACTGAACGAGCATGGACAGGGGGTACGGAG 3093
                       ** ** *   ****************     ** * ** ** ****  ***** ** ***

H.sapiens              TCAGAAATGTTCAATAAGCTTGAGAGCATTGCTACGTCTGACATACCACGTACCCCGGTG 3381
Human'                 TCAGAAATGTTCAATAAGCTTGAGAGCATTGCTACGTCTGACATACCACGTACCCCGGTG 3328
Human                  TCAGAAATGTTCAATAAGCTTGAGAGCATTGCTACGTCTGACATACCACGTACCCCGGTG 3504
Macaca                 TCAGAAATGTTCAATAAGCTTGAGAGCATTGCTACGTCTGACATACCACGTACCCCGGTG 3471
Pan                    TCAGAAATGTTCAATAAGCTTGAGAGCATTGCCACGTCTGACATACCACGTACCCCGGTG 3519
Bos                    TCAGAAATGTTCAACAAGCTGGAGAGCATTGCCACATCTGACATACCGCGTACCCCGGTG 3477
M.musculus_Polg__      TCAGAAATGTTTAATAAGCTGGAGAGTATTGCCATGTCTGATACACCACGTACCCCAGTA 3520
M.musculus             TCAGAAATGTTTAATAAGCTGGAGAGTATTGCCATGTCTGATACACCACGTACCCCAGTA 3440
R.norvegicus           TCAGAAATGTTTAATAAGCTGGAGAGCATTGCCATGTCTGACACACCACGCACCCCAGTG 3153
                       *********** ** ***** ***** ***** *  ***** * *** ** ***** ** 

H.sapiens              CTGGGCTGCTGCATCAGCCGAGCCCTGGAGCCCTCGGCTGTCCAGGAAGAGTTTATGACC 3441
Human'                 CTGGGCTGCTGCATCAGCCGAGCCCTGGAGCCCTCGGCTGTCCAGGAAGAGTTTATGACC 3388
Human                  CTGGGCTGCTGCATCAGCCGAGCCCTGGAGCCCTCGGCTGTCCAGGAAGAGTTTATGACC 3564
Macaca                 CTGGGCTGCCGCATCAGCCGAGCCCTGGAGCCCTCGGCTGTCCAGGGAGAGTTTATGACC 3531
Pan                    CTGGGCTGCTGCATCAGCCGAGCCCTGGAGCCCTCGGCTGTCCAGGAAGAGTTTATGACC 3579
Bos                    TTGGGCTGCCGCATCAGCCGGGCCCTGGAACCCTGTGCTGTCCGCGGGGAGTTTATGACC 3537
M.musculus_Polg__      CTGGGCTGCTGCATCAGCAGAGCCTTGGAGCCCTCAGTTGTCCAGGGAGAGTTTATAACC 3580
M.musculus             CTGGGCTGCTGCATCAGCAGAGCCTTGGAGCCCTCAGTTGTCCAGGGAGAGTTTATAACC 3500
R.norvegicus           CTGGGCTGCTGCATCAGCAGAGCCTTGGAGCCCTCGGTTGTCCAGGGAGAGTTTATGACC 3213
                        ******** ******** * *** **** ****  * *****  *  ******** ***

H.sapiens              AGCCGTGTGAATTGGGTGGTACAGAGCTCTGCTGTTGACTACTTACACCTCATGCTTGTG 3501
Human'                 AGCCGTGTGAATTGGGTGGTACAGAGCTCTGCTGTTGACTACTTACACCTCATGCTTGTG 3448
Human                  AGCCGTGTGAATTGGGTGGTACAGAGCTCTGCTGTTGACTACTTACACCTCATGCTTGTG 3624
Macaca                 AGCCGTGTGAATTGGGTGGTACAGAGCTCTGCTGTTGACTACTTACACCTCATGCTTGTG 3591
Pan                    AGCCGTGTGAATTGGGTGGTACAGAGCTCTGCTGTTGACTACTTACACCTCATGCTTGTG 3639
Bos                    AGCCGAGTGAACTGGGTGGTGCAGAGCTCCGCGGTGGACTACCTGCACCTCATGCTTGTG 3597
M.musculus_Polg__      AGTCGTGTGAACTGGGTGGTACAGAGCTCTGCTGTAGACTACTTACATCTCATGCTTGTG 3640
M.musculus             AGTCGTGTGAACTGGGTGGTACAGAGCTCTGCTGTAGACTACTTACATCTCATGCTTGTG 3560
R.norvegicus           AGTCGTGTGAATTGGGTGGTACAGAGCTCTGCTGTGGACTACTTACACCTCATGCTTGTG 3273
                       ** ** ***** ******** ******** ** ** ****** * ** ************

H.sapiens              GCCATGAAGTGGCTGTTTGAAGAGTTTGCCATAGATGGGCGCTTCTGCATCAGCATCCAT 3561
Human'                 GCCATGAAGTGGCTGTTTGAAGAGTTTGCCATAGATGGGCGCTTCTGCATCAGCATCCAT 3508
Human                  GCCATGAAGTGGCTGTTTGAAGAGTTTGCCATAGATGGGCGCTTCTGCATCAGCATCCAT 3684
Macaca                 GCCATGAAGTGGCTGTTTGAAGAGTTTGCCATAGATGGGCGCTTCTGCATCAGCATCCAT 3651
Pan                    GCCATGAAGTGGCTGTTTGAAGAGTTTGCCATAGATGGGCGCTTCTGCATCAGCATCCAT 3699
Bos                    GCCATGAAGTGGCTGTTCGAGGAGTTTGCCATTGACGGGCGCTTCTGCATCAGCATCCAC 3657
M.musculus_Polg__      GCCATGAAGTGGCTGTTTGAGGAATTTGCCATTGATGGGCGCTTCTGCATCAGCATCCAC 3700
M.musculus             GCCATGAAGTGGCTGTTTGAGGAATTTGCCATTGATGGGCGCTTCTGCATCAGCATCCAC 3620
R.norvegicus           GCCATGAAGTGGCTGTTTGAGGAATTTGCCATTGATGGGCGCTTCTGCATCAGCATCCAT 3333
                       ***************** ** ** ******** ** *********************** 

H.sapiens              GACGAGGTTCGCTACCTGGTGCGGGAGGAGGACCGCTACCGCGCTGCCCTGGCCTTGCAG 3621
Human'                 GACGAGGTTCGCTACCTGGTGCGGGAGGAGGACCGCTACCGCGCTGCCCTGGCCTTGCAG 3568
Human                  GACGAGGTTCGCTACCTGGTGCGGGAGGAGGACCGCTACCGCGCTGCCCTGGCCTTGCAG 3744
Macaca                 GACGAAGTTCGCTACCTGGTGCGGGAGGAGGACCGCTACCGTGCTGCCCTGGCCCTGCAG 3711
Pan                    GACGAGGTTCGCTACCTGGTGCGGGAGGAGGACCGCTACCGCGCTGCCCTGGCCTTGCAG 3759
Bos                    GATGAGGTTCGCTACCTGGTGCGGGAGGAGGACCGATACCGCGCGGCCCTCGCCCTGCAA 3717
M.musculus_Polg__      GACGAGGTTCGCTACCTGGTGCGTGAGGAGGACCGCTACCGTGCCGCCCTGGCACTGCAG 3760
M.musculus             GACGAGGTTCGCTACCTGGTGCGTGAGGAGGACCGCTACCGTGCCGCCCTGGCACTGCAG 3680
R.norvegicus           GATGAGGTGCGCTACCTGGTACGTGAGGAGGACCGCTACCGTGCTGCCCTGGCACTGCAG 3393
                       ** ** ** *********** ** *********** ***** ** ***** **  **** 

H.sapiens              ATCACCAACCTCTTGACCAGGTGCATGTTTGCCTACAAGCTGGGTCTGAATGACTTGCCC 3681
Human'                 ATCACCAACCTCTTGACCAGGTGCATGTTTGCCTACAAGCTGGGTCTGAATGACTTGCCC 3628
Human                  ATCACCAACCTCTTGACCAGGTGCATGTTTGCCTACAAGCTGGGTCTGAATGACTTGCCC 3804
Macaca                 ATCACCAACCTCTTGACCAGGTGCATGTTTGCCTACAAGCTGGGTCTGAATGACTTGCCC 3771
Pan                    ATCACCAACCTCTTGACCAGGTGCATGTTTGCCTACAAGCTGGGTCTGAATGACTTGCCC 3819
Bos                    ATCACCAACCTCCTGACCAGGTGCATGTTTGCCCACAAGCTGGGTCTGAATGACCTGCCC 3777
M.musculus_Polg__      ATCACCAATCTCCTGACCAGGTGCATGTTTGCCTATAAGCTGGGTCTGAATGATCTGCCC 3820
M.musculus             ATCACCAATCTCCTGACCAGGTGCATGTTTGCCTATAAGCTGGGTCTGAATGATCTGCCC 3740
R.norvegicus           ATCACCAATCTCCTGACCAGGTGCATGTTTGCCTACAAGCTGGGTCTGAATGACCTGCCC 3453
                       ******** *** ******************** * *****************  *****

H.sapiens              CAGTCAGTCGCCTTTTTCAGTGCAGTCGATATTGACCGGTGCCTCAGGAAGGAAGTGACC 3741
Human'                 CAGTCAGTCGCCTTTTTCAGTGCAGTCGATATTGACCGGTGCCTCAGGAAGGAAGTGACC 3688
Human                  CAGTCAGTCGCCTTTTTCAGTGCAGTCGATATTGACCGGTGCCTCAGGAAGGAAGTGACC 3864
Macaca                 CAGTCAGTCGCCTTTTTCAGTGCAGTTGATATTGACCGGTGCCTCAGGAAGGAAGTGACC 3831
Pan                    CAGTCAGTCGCCTTTTTCAGTGCAGTCGATATTGACCGGTGCCTCAGGAAGGAAGTGACC 3879
Bos                    CAGTCAGTGGCGTTTTTCAGCACAATCGATATTGACCAGTGCCTCAGGAAGGAAGTGACC 3837
M.musculus_Polg__      CAGTCAGTCGCCTTTTTCAGTGCAGTAGACATTGACCAGTGCCTCAGGAAGGAAGTGACC 3880
M.musculus             CAGTCAGTCGCCTTTTTCAGTGCAGTAGACATTGACCAGTGCCTCAGGAAGGAAGTGACC 3800
R.norvegicus           CAGTCAGTTGCCTTTTTCAGTGCAGTAGACATTGACCAGTGCCTCAGGAAGGAAGTGACC 3513
                       ******** ** ********  ** * ** ******* **********************

H.sapiens              ATGGATTGTAAAACCCCTTCCAACCCAACTGGGATGGAAAGGAGATACGGGATTCCCCAG 3801
Human'                 ATGGATTGTAAAACCCCTTCCAACCCAACTGGGATGGAAAGGAGATACGGGATTCCCCAG 3748
Human                  ATGGATTGTAAAACCCCTTCCAACCCAACTGGGATGGAAAGGAGATACGGGATTCCCCAG 3924
Macaca                 ATGGATTGTAAAACCCCTTCCAACCCAACTGGGATGGAAAGGAGATACGGGATTCCCCAG 3891
Pan                    ATGGATTGTAAAACCCCTTCCAACCCAACTGGGATGGAAAGGAGATACGGGATTCCCCAG 3939
Bos                    ATGGACTGTAAAACCCCTTCTAACCCAACTGGGATGGAAAGGCGATACGGGATTCCCCAG 3897
M.musculus_Polg__      ATGGACTGTAAAACTCCTTCTAACCCAACTGGGATGGAAAGGAGATATGGGATCCCCCAG 3940
M.musculus             ATGGACTGTAAAACTCCTTCTAACCCAACTGGGATGGAAAGGAGATATGGGATCCCCCAG 3860
R.norvegicus           ATGGACTGTAAAACTCCTTCTAACCCAACTGGGATGGAAAGGAAATACGGGATTCCCCAG 3573
                       ***** ******** ***** *********************  *** ***** ******

H.sapiens              GGTGAAGCGCTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCTTGGAAAAACG- 3860
Human'                 GGTGAAGCGCTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCTTGGAAAAACG- 3807
Human                  GGTGAAGCGCTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCTTGGAAAAACG- 3983
Macaca                 GGTGAAGCGCTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCTTGGAAAAACG- 3950
Pan                    GGTGAAGCGCTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCTTGGAAAAACG- 3998
Bos                    GGTGAAGCGCTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCCTGGAGAAATG- 3956
M.musculus_Polg__      GGTGAAGCACTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCTTGGAAAAACG- 3999
M.musculus             GGTGAAGCACTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCTTGGAAAAACGG 3920
R.norvegicus           GGTGAAGCACTGGATATTTACCAGATAATTGAACTCACCAAAGGCTCCTTGGAAAAACG- 3632
                       ******** *************************************** **** *** * 

H.sapiens              AAGCCAGCCTGGACCATAGCACTGCCTGGAGGCTCTGTATTTGCTCCCGTGGAGCTTCAT 3920
Human'                 AAGCCAGCCTGGACCATAGCACTGCCTGGAGGCTCTGTATTTGCTCCCGTGGAGCTTCAT 3867
Human                  AAGCCAGCCTGGACCATAGCACTGCCTGGAGGCTCTGTATTTGCTCCCGTGGAGCTTCAT 4043
Macaca                 AAGCCAGCCTGGACCATAGCACTGCCTGGAGGCTCTGTATTTGCTCCCATGGAGCTTCAT 4010
Pan                    AAGCCAGCCTGGACCATAGCACTGCCTGGAGGCTCTGTATTTGCTCCCGTGGAGCTTCAT 4058
Bos                    AAGCCAGCCTGGACTATAG----------------------------------------- 3975
M.musculus_Polg__      AAGCCAGCCTGGACCCTAGCTCTGTCTGGAGGTTCTGTATTTGCTCCTGTGGAGCTTTAT 4059
M.musculus             AAGCCAGCCTGGACCCTAGCTCTGTCTGGAGGTTCTGTATTTGCTCCTGTGGAGCTTTAT 3980
R.norvegicus           AAGCCAGCCTGGACCCTAG----------------------------------------- 3651
                       **************  ***                                         

H.sapiens              CGGGGTGG-TGCAGGCTCCCAAACTCAGGCTTTCAGCTGTGCTTTTTGCAAAAGGGCTTG 3979
Human'                 CGGGGTGGGTGCAGGCTCCCAAACTCAGGCTTTCAGCTGTGCTTTTTGCAAAACGGCTTG 3927
Human                  CGGGGTGG-TGCAGGCTCCCAAACTCAGGCTTTCAGCTGTGCTTTTTGCAAAAGGGCTTG 4102
Macaca                 CGGGGCGG-TGCAGGCTCCCAAACTCAGGCTTTCAGCTGTGCTTTTTGCAAAAGGGCTTG 4069
Pan                    CAGGGTGG-TGCAGGCTCCCAAACTCAGGCTTTCAGCTGTGCTTTTTGCAAAAGGGCTTG 4117
Bos                    ------------------------------------------------------------
M.musculus_Polg__      TGGAGCGG-TGCAGGTTCCTAAACTCAGGCTTTCAGATGTGCTTTTTTGCAAAAGGC--- 4115
M.musculus             TGGAGCGG-TGCAGGTTCCTAAACTCAGGCTTTCAGATGTGCTTTTTTGCAAAAGGC--- 4036
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              C-TAAGGCCAGCCATTTTTCAGTAGCAGGACCTGCCAAGAAGATTCCTTCTAACTGAAGG 4038
Human'                 CCTAAGGCCAGCCATTTTTCAGTAGCAGGACCTGCCAAGAAGATTCCTTCTAACTGAAGG 3987
Human                  CCTAAGGCCAGCCATTTTTCAGTAGCAGGACCTGCCAAGAAGATTCCTTCTAACTGAAGG 4162
Macaca                 CCTAAGGCCAGCCATTTTTCAGTAGCAGGACCTGCCAAGAAGATTCCTTCTAACTGAAGG 4129
Pan                    CCTAAGGCCAGCCATTTTTCAGTAGCAGGACCTGCCAAGAAGATTCCTTCTAACTGAAGG 4177
Bos                    ------------------------------------------------------------
M.musculus_Polg__      ---------AGCCATTTTTCTGTAGCAGGACCTGCCCAGGAAAGTCCTCCTAACGGAAGG 4166
M.musculus             ---------AGCCATTTTTCTGTAGCAGGACCTGCCCAGGAAAGTCCTCCTAACGGAAGG 4087
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              TGCAGTTGAATTCAGTGGGTTCAGAACCAAGATGCCAACATCGGTGTGGACTACAGGACA 4098
Human'                 TGCAGTTGAATTCAGTGGGTTCAGAACCAAGATGCCAACATCGGTGTGGACTACAGGACA 4047
Human                  TGCAGTTGAATTCAGTGGGTTCAGAACCAAGATGCCAACATCGGTGTGGACTACAGGACA 4222
Macaca                 TGCAGTTGAATTCAGTGGGTTCAGAACTAAGATGCCAACATCGGTGTGGGCTGTAGGACA 4189
Pan                    TGCAGTTGAATTCAGTGGGTTCAGAACCAAGATGCCAAC-CAAGCACGCA---------- 4226
Bos                    ------------------------------------------------------------
M.musculus_Polg__      CACA-----ATTCAGTGCGTTCAGAACCAGGACACCAACATCAGTGCAGGCTGTGTGACA 4221
M.musculus             CACA-----ATTCAGTGCGTTCAGAACCAGGACACCAACATCAGTGCAGGCTGTGTGACA 4142
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              AGGGGCATTGTTGCTTGTTGGGTAAAAATGAAGCAGAAGCCCCAAAGTTCACATTAACTC 4158
Human'                 AGGGGCATTGTTGCTTGTTGGGTAAAAATGAAGCAGAAGCCCCAAAGTTCACATTAACTC 4107
Human                  AGGGGCATTGTTGCTTGTTGGGTAAAAATGAAGCAGAAGCCCCAAAGTTCACATTAACTC 4282
Macaca                 AGGGGCATTGTTGCTTGTTGGGTAAAAACGAAGCAGAAGCCCCAAAGTTCACATTAACTC 4249
Pan                    ------------------------------------------------------------
Bos                    ------------------------------------------------------------
M.musculus_Polg__      AGGGGTACTGTTG-------GGCACAAATGAAGCAGATGCCCCAAAGGTCACATTAACTC 4274
M.musculus             AGGGGTACTGTTG-------GGCACAAATGAAGCAGATGCCCCAAAGGTCACATTAACTC 4195
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              AGGCATTTCATTTATTTTTTCCTTTTCTTCTTGGCTGGTTCTTTGTTCTGTCCCCCATGC 4218
Human'                 AGGCATTTCATTTATTTTTTCCTTTTCTTCTTGGCTGGTTCTTTGTTCTGTCCCCCATGC 4167
Human                  AGGCATTTCATTTATTTTTTCCTTTTCTTCTTGGCTGGTTCTTTGTTCTGTCCCCCATGC 4342
Macaca                 AGGCATTTCATTTATTTTTTCCTTTTCTTCTTGGCTGGTTCTTTGTTCTGTTCACCATGC 4309
Pan                    ------------------------------------------------------------
Bos                    ------------------------------------------------------------
M.musculus_Polg__      AGGCATTTC---------TTCCTCCTCTTCTTGGCTGGTTCTCTGTCCTGCTGTGTATGT 4325
M.musculus             AGGCATTTC---------TTCCTCCTCTTCTTGGCTGGTTCTCTGTCCTGCTGTGTATGT 4246
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              TCTGATGCAGTGCCCTAGAAGGGGAAAGAATTAATGCTCTAACGTGATAAACCTGCTCCA 4278
Human'                 TCTGATGCAGTGCCCTAGAAGGGGAAAGAATTAATGCTCTAACGTGATAAACCTGCTCCA 4227
Human                  TCTGATGCAGTGCCCTAGAAGGGGAAAGAATTAATGCTCTAACGTGATAAACCTGCTCCA 4402
Macaca                 TCTGATGCAGTGCCCTAGAAGGGAAAAGAAGTAATGCTCTAACGTGATAAACCTGCTCCA 4369
Pan                    ------------------------------------------------------------
Bos                    ------------------------------------------------------------
M.musculus_Polg__      GCTGATGCAGTGCCCTAGAAGGGGAGAGTAGAAAT-------TTTGACAACCTTGTTCTA 4378
M.musculus             GCTGATGCAGTGCCCTAGAAGGGGAGAGTAGAAAT-------TTTGACAACCTTGTTCTA 4299
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              AGGCAGTGGAAATAAAAAGAAGGAAAAAAAAAAAAAAAAAAA------------------ 4320
Human'                 AGGCAGTGGAAATAAAAAGAAGGAAAAAAAAGACTC------------------------ 4263
Human                  AGGCAGTGGAAATAAAAAGAAGGAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4462
Macaca                 AAGCAGTGGAAATAAAAAGAAGAAGAAAAAAAAAAATCTATCTTCTCATC---------- 4419
Pan                    ------------------------------------------------------------
Bos                    ------------------------------------------------------------
M.musculus_Polg__      AGGTGATGGGAATAAAAACAAACACCAAACTCCTGGAACAGTTGTGCTTTCCCGTCTGCT 4438
M.musculus             AGGTGATGGGAATAAAAACAAACACCAAACTCCTGGAACAGTTGTGCTTTCCCGTCTGCT 4359
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              ------------------------------------------------------------
Human'                 ------------------------------------------------------------
Human                  AAT--------------------------------------------------------- 4465
Macaca                 ------------------------------------------------------------
Pan                    ------------------------------------------------------------
Bos                    ------------------------------------------------------------
M.musculus_Polg__      GCCCAGGTTGTGACTTAGAACTCCGTCCTGAGTAGATGGACGAGATGCTGGGAGCCCGGA 4498
M.musculus             GCCCAGGTTGTGACTTAGAACTCCGTCCTGAGTAGATGGACGAGATGCTGGGAGCCCGGA 4419
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              ------------------------------------------------------------
Human'                 ------------------------------------------------------------
Human                  ------------------------------------------------------------
Macaca                 ------------------------------------------------------------
Pan                    ------------------------------------------------------------
Bos                    ------------------------------------------------------------
M.musculus_Polg__      GCATCACAGCTACAGACGGCCTGGGGCACAGTGATGTACGGAACTCCGCATCAGCCGGCT 4558
M.musculus             GCATCACAGCTACAGACGGCCTGGGGCACAGTC-CGTACNGAACTGNNCATCANCNAGCT 4478
R.norvegicus           ------------------------------------------------------------
                                                                                   

H.sapiens              ---------------------------------------------
Human'                 ---------------------------------------------
Human                  ---------------------------------------------
Macaca                 ---------------------------------------------
Pan                    ---------------------------------------------
Bos                    ---------------------------------------------
M.musculus_Polg__      AGCCAGATTATTTTATATAAATGTCTAATTTTGACTGG------- 4596
M.musculus             AGCCAGATTATTTTATATAAATNTCTAATTTTTACTGGGAAGAAA 4523
R.norvegicus           ---------------------------------------------
                                                                    
PLEASE NOTE: Showing colors on large alignments is slow.




Guide Tree

(
(
(
(
(
(
M.musculus_Polg__:0.00223,
M.musculus:0.00684)
:0.04152,
R.norvegicus:0.01174)
:0.05352,
Bos:0.07096)
:0.03642,
Pan:0.01446)
:0.00800,
Macaca:0.01350)
:0.01399,
(
H.sapiens:-0.00021,
Human':0.00373)
:0.00605,
Human:-0.00617);


Cladogram

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