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This tree was produced using BLAST pairwise alignments. more...

  Help:Tree method
Algorithm used to produce a tree from a given matrix of distances. For BLASTN or megaBLAST the Jukes-Cantor method is used to calculate the distances, for all other programs the Kimura method is used.
  Help:Sequence Label
Text used in the tree to describe the sequences. Blast Names are informal high level taxonomic categories. The color of the terminal node indicates the Blast Name of a sequence.
  Help:Max Seq Difference
Fraction of mismatching letters in the tree.This value is known as the "difference" and is used to calculate the "distance"between any two sequences in the alignment.The current method used to calculate a distance allows at most a maximum difference of 0.75.To see sequences not used in constructing the tree use the "Show removed sequences" link.

rectangle  slanted  radial  force  Mouse over an internal node for a subtree or alignment PREDICTED: Monodelphis domestica similar to peptide methionine sulfoxide reductase (LOC100033156), mRNAPREDICTED: Pan troglodytes similar to cytosolic methionine-S-sulfoxide reductase, transcript variant 1 (LOC739556), mRNAPREDICTED: Pan troglodytes similar to cytosolic methionine-S-sulfoxide reductase, transcript variant 5 (LOC739556), mRNAPREDICTED: Pan troglodytes similar to cytosolic methionine-S-sulfoxide reductase, transcript variant 6 (LOC739556), mRNAPREDICTED: Pan troglodytes similar to cytosolic methionine-S-sulfoxide reductase, transcript variant 7 (LOC739556), mRNAHomo sapiens mRNA for peptide methionine sulfoxide reductase (msrA gene)Homo sapiens methionine sulfoxide reductase A, mRNA (cDNA clone MGC:64957 IMAGE:6504055), complete cdsHomo sapiens peptide methionine sulfoxide reductase mRNA, complete cdsHomo sapiens cytosolic methionine-S-sulfoxide reductase (MSRA) mRNA, complete cds, alternatively splicedHomo sapiens methionine sulfoxide reductase A2 mRNA, complete cds, alternatively splicedHomo sapiens methionine sulfoxide reductase A3 mRNA, complete cds, alternatively splicedHomo sapiens methionine sulfoxide reductase A, mRNA (cDNA clone IMAGE:5302099), with apparent retained intronHomo sapiens methionine sulfoxide reductase A1 mRNA, complete cds, alternatively splicedHomo sapiens methionine sulfoxide reductase A (MSRA), mRNAHomo sapiens methionine sulfoxide reductase mRNA, complete cdsPREDICTED: Pan troglodytes similar to cytosolic methionine-S-sulfoxide reductase, transcript variant 4 (LOC739556), mRNAPREDICTED: Pan troglodytes similar to cytosolic methionine-S-sulfoxide reductase, transcript variant 3 (LOC739556), mRNAPREDICTED: Pan troglodytes similar to cytosolic methionine-S-sulfoxide reductase, transcript variant 2 (LOC739556), mRNAMacaca fascicularis mRNA, clone QccE-19538: similar to Homo sapiens methionine sulfoxide reductase A (MSRA), NM_012331.2PREDICTED: Macaca mulatta similar to Peptide methionine sulfoxide reductase (Protein-methionine-S-oxide reductase) (PMSR) (Peptide Met(O) reductase), transcript variant 3 (MSRA), mRNAPREDICTED: Macaca mulatta similar to Peptide methionine sulfoxide reductase (Protein-methionine-S-oxide reductase) (PMSR) (Peptide Met(O) reductase), transcript variant 1 (MSRA), mRNAPREDICTED: Macaca mulatta similar to Peptide methionine sulfoxide reductase (Protein-methionine-S-oxide reductase) (PMSR) (Peptide Met(O) reductase), transcript variant 2 (MSRA), mRNABos taurus methionine sulfoxide reductase A, mRNA (cDNA clone MGC:128238 IMAGE:7985018), complete cdsBos taurus methionine sulfoxide reductase A (MSRA), mRNABos taurus methionine sulfoxide reductase A (MSRA), mRNA, complete cdsSus scrofa mRNA, clone:LVRM10142H04, expressed in liverSus scrofa mRNA, clone:LVRM10087F01, expressed in liverPREDICTED: Canis familiaris similar to Peptide methionine sulfoxide reductase (Protein-methionine-S-oxide reductase) (PMSR) (Peptide Met(O) reductase) (LOC608103), mRNATaeniopygia guttata clone 0069P0006G11 methionine sulfoxide reductase A variant 2-like mRNA, complete sequencePREDICTED: Gallus gallus similar to cytosolic methionine-S-sulfoxide reductase (LOC422027), mRNARattus norvegicus methionine sulfoxide reductase A (Msra), mRNARattus norvegicus peptide methionine sulfoxide reductase mRNA, complete cdsMus musculus BAC clone RP23-259P17 from chromosome 14, complete sequenceMus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530413P12 product:similar to PEPTIDE METHIONINE SULFOXIDE REDUCTASE [Rattus norvegicus], full insert sequenceMus musculus methionine sulfoxide reductase A (Msra)(query)Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610008P03 product:PEPTIDE METHIONINE SULFOXIDE REDUCTASE homolog [Rattus norvegicus], full insert sequenceMus musculus BAC clone RP23-107H9 from chromosome 14, complete sequenceMus musculus methionine sulfoxide reductase A, mRNA (cDNA clone MGC:25961 IMAGE:4239349), complete cdsMus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530043P13 product:PEPTIDE METHIONINE SULFOXIDE REDUCTASE homolog [Rattus norvegicus], full insert sequenceMus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310045J23 product:PEPTIDE METHIONINE SULFOXIDE REDUCTASE homolog [Rattus norvegicus], full insert sequenceMus musculus methionine sulfoxide reductase A (Msra), mRNA
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