Tree view for rid: , query ID: , database:

This tree was produced using BLAST pairwise alignments. more...

  Help:Tree method
Algorithm used to produce a tree from a given matrix of distances. For BLASTN or megaBLAST the Jukes-Cantor method is used to calculate the distances, for all other programs the Kimura method is used.
  Help:Sequence Label
Text used in the tree to describe the sequences. Blast Names are informal high level taxonomic categories. The color of the terminal node indicates the Blast Name of a sequence.
  Help:Max Seq Difference
Fraction of mismatching letters in the tree.This value is known as the "difference" and is used to calculate the "distance"between any two sequences in the alignment.The current method used to calculate a distance allows at most a maximum difference of 0.75.To see sequences not used in constructing the tree use the "Show removed sequences" link.

rectangle  slanted  radial  force  Mouse over an internal node for a subtree or alignment Sus scrofa clone Clu_138477.scr.msk.p1.Contig1, mRNA sequenceBos taurus CCAAT/enhancer binding protein (C/EBP), gamma (CEBPG), mRNABos taurus CCAAT/enhancer binding protein (C/EBP), gamma (CEBPG), mRNA, incomplete 5Pongo pygmaeus mRNA; cDNA DKFZp459B113 (from clone DKFZp459B113)Homo sapiens CCAAT/enhancer binding protein (C/EBP), gamma (CEBPG), mRNAfull-length cDNA clone CS0DK005YD08 of HeLa cells Cot 25-normalized of Homo sapiens (human)Homo sapiens CCAAT/enhancer binding protein (C/EBP), gamma, mRNA (cDNA clone MGC:15566 IMAGE:3139979), complete cdsHuman C/EBP gamma mRNA, complete cdsHomo sapiens CCAAT/enhancer binding protein (C/EBP), gamma, mRNA (cDNA clone MGC:5089 IMAGE:3445301), complete cdsSynthetic construct clone IMAGE:100010915; FLH194476.01L; RZPDo839B1070D CCAAT/enhancer binding protein (C/EBP), gamma (CEBPG) gene, encodes complete proteinHomo sapiens CCAAT/enhancer binding protein (C/EBP), gamma mRNA, complete cdsHomo sapiens CCAAT/enhancer binding protein (C/EBP), gamma mRNA, complete cdsSynthetic construct Homo sapiens clone FLH030219.01L CCAAT/enhancer binding protein gamma (CEBPG) mRNA, partial cdsSynthetic construct Homo sapiens clone FLH030223.01X CCAAT/enhancer binding protein gamma (CEBPG) mRNA, complete cdsSynthetic construct Homo sapiens clone FLH019423.01X CCAAT/enhancer binding protein gamma (CEBPG) mRNA, complete cdsSynthetic construct Homo sapiens clone FLH010310.01X CCAAT/enhancer binding protein gamma (CEBPG) mRNA, complete cdsSynthetic construct Homo sapiens clone FLH010309.01X CCAAT/enhancer binding protein gamma (CEBPG) mRNA, complete cdsSynthetic construct Homo sapiens clone FLH019419.01L CCAAT/enhancer binding protein gamma (CEBPG) mRNA, partial cdsSynthetic construct Homo sapiens clone FLH056663.01X CCAAT/enhancer binding protein gamma (CEBPG) mRNA, complete cdsHomo sapiens chromosome 19 clone CTD-2561O20, complete sequencePREDICTED: Macaca mulatta similar to CCAAT/enhancer-binding protein gamma (C/EBP gamma), transcript variant 2 (CEBPG), mRNAPREDICTED: Macaca mulatta similar to CCAAT/enhancer-binding protein gamma (C/EBP gamma), transcript variant 1 (CEBPG), mRNARattus norvegicus CCAAT/enhancer binding protein (C/EBP), gamma (Cebpg), mRNAMus musculus mRNA for GPE1-BP (C/EBP gamma), complete cdsMus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420023H20 product:CCAAT/enhancer binding protein (C/EBP), gamma, full insert sequenceM.musculus Ig/EBP-1 gene for immunoglobulin enhancer binding proteinMus musculus gene for GPE1-BP (C/EBP gamma), complete cdsMus musculus CCAAT/enhancer binding protein (C/EBP), gamma, mRNA (cDNA clone MGC:11669 IMAGE:3709074), complete cdsMus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920026F03 product:CCAAT/enhancer binding protein (C/EBP), gamma, full insert sequenceMus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830015E04 product:CCAAT/enhancer binding protein (C/EBP), gamma, full insert sequenceMus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830213E19 product:CCAAT/enhancer binding protein (C/EBP), gamma, full insert sequenceMus musculus cDNA, clone:Y1G0114D01, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000070191, based on BLAT searchMus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920020E03 product:CCAAT/enhancer binding protein (C/EBP), gamma, full insert sequenceMus musculus CCAAT/enhancer binding protein (C/EBP), gamma (Cebpg), mRNAMus musculus CCAAT/enhancer binding protein (C/EBP)(query)Mus musculus BAC clone RP23-338G5 from chromosome 7, complete sequence
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