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CLUSTAL W (1.82) Multiple Sequence Alignments
Sequence format is Pearson
Sequence 1: equino 780 bp
Sequence 2: bovino 900 bp
Sequence 3: Fringilla 780 bp
Sequence 4: canino 900 bp
Sequence 5: ximpanzé 900 bp
Sequence 6: VPH6 900 bp
Sequence 7: VPH11 900 bp
Sequence 8: VPH16 900 bp
Sequence 9: VPH18 960 bp
Sequence 10: VPH31 900 bp
Sequence 11: VPH45 960 bp
Start of Pairwise alignments
Aligning...
Guide tree file created: [/ebi/extserv/old-work/clustalw-20030611-03637156.dnd]
Start of Multiple Alignment
There are 10 groups
Aligning...
Group 9: Delayed was aligning: (2 ) and (3 )
Group 1: Delayed was aligning: (1 ) and (4 )
Group 4: Sequences: 2 Score: 13364 (from rank 1) was aligning: (8 ) and (10 )
Group 2: Sequences: 2 Score: 15295 (from rank 3) was aligning: (6 ) and (7 )
Group 5: Sequences: 2 Score: 15919 (from rank 2) was aligning: (9 ) and (11 )
Group 3: Sequences: 3 Score: 13306 (from rank 4) was aligning: (5 ) and (6 7 )
Group 6: Sequences: 4 Score: 11307 (from rank 5) was aligning: (8 10 ) and (9 11 )
Group 7: Sequences: 7 Score: 9428 (from rank 7) was aligning: (5 6 7 ) and (8 9 10 11 )
Group 8: Delayed was aligning: (1 4 ) and (5 6 7 8 9 10 11 )
Group 10: Delayed was aligning: (1 4 5 6 7 8 9 10 11 ) and (2 3 )
Sequence:4 Score:7968 was aligning: (5 6 7 8 9 10 11 ) and (4 )
Sequence:1 Score:6843 was aligning: (4 5 6 7 8 9 10 11 ) and (1 )
Sequence:2 Score:7327 was aligning: (1 4 5 6 7 8 9 10 11 ) and (2 )
Sequence:3 Score:5814 was aligning: (1 2 4 5 6 7 8 9 10 11 ) and (3 )
Alignment Score 110411
CLUSTAL-Alignment file created [/ebi/extserv/old-work/clustalw-20030611-03637156.aln]
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Your Multiple Sequence
Alignment
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CLUSTAL W (1.82) multiple sequence alignment
VPH6 -----GTTGTATATAAACCAGCCCT-AAAATTTAGCAAACGAGGCATTATGGAAAGTGCA 54
VPH11 ------TTATATATAAACCAGCCCA-AAAAATTAGCAGACGAGGCATTATGGAAAGTAAA 53
ximpanzé -------GATATATAAACCAGCCCA-AAAATTGAGCAAGCGGGGCATAATGGAAAGTGTT 52
VPH16 -----TTAGTATA-AAAGCAGACAT-T-TTATGCACCAAAAGAGAACTGCAATGTTTCAG 52
VPH31 ---GGTTGGTATATAAAGCACATAG-TATTTTGTGCAAACCTACAGACGCCATGTTCAAA 56
VPH18 -GAAAACGGTGTATATAAAAGATGTGAGAAACACACCACAATACTATGGCGCGCTTTGAG 59
VPH45 ----AACGGTGCATATAAAAGCTTTGTGGAAAAGTGCATTACAGGATGGCGCGCTTTGAC 56
canino CGATTTCGGTCCTGGCAACTGTTTCGGTCGGTATATATAGCATGTTTTGGGGGGCACTGT 60
equino ------------------------------------------------------------
bovino ----------------------------------------------------------AA 2
Fringilla ------------------------------------------------------------
VPH6 AATGCCTCCACGTCTGCAACGACCATAGACCAGTTGTGCAAGACGTTTAATCTATCTATG 114
VPH11 GATGCCTCCACGTCTGCAACATCTATAGACCAGTTGTGCAAGACGTTTAATCTTTCTTTG 113
ximpanzé AATGCCTCCACGCCTGCAAAAACGATAGACCAGTTGTGCAAGGACTGCAACCTTTGTATG 112
VPH16 GACCCACAGGAGCGACCCAGAAAGTTACCACAGTTATGCACAGAGCTGCAAACAACTATA 112
VPH31 AATCCTGCAGAAAGACCTCGGAAATTGCATGAACTAAGCTCGGCATTGGAAATACCCTAC 116
VPH18 GATCCAACACGGCGACCCTACAAGCTACCTGATCTGTGCACGGAACTGAACACTTCACTG 119
VPH45 GATCCAAAGCAACGACCCTACAAGCTACCAGATTTGTGCACAGAATTGAATACATCACTA 116
canino TAT-CAATGGAGCGCCCGACGTCGGTGAGAGATCTTTGCATGTCTCTAAAGCTCTCTTTG 119
equino ---------------------------------------------ATGGCGCGGCCGCGA 15
bovino AAAGCTGCTGACAGACCCCGGTTTTCACATGGACC-TGAAACCTTTTGCAAGAACCAATC 61
Fringilla -------------------------------------------ATGCGTAATAGGCTGCC 17
VPH6 CATACGTTGCAAATTAATTGTGTGTTTTGCAAGAATGCACTGACCACTGCAG------AG 168
VPH11 CACACTCTGCAAATTCAGTGCGTGTTTTGCAGGAATGCACTGACCACCGCAG------AG 167
ximpanzé CACAGTTTGCAGATTTTATGCGTGTTTTGCAAGAAAACCCTGTCCACTGCAGCTGCAGAG 172
VPH16 CATGATATAATATTAGAATGTGTGTACTGCAAGCAACAGTTACTGCGACGTG------AG 166
VPH31 GATGAACTAAGATTGAATTGTGTCTACTGCAAAGGTCAGTTAACAGAAACAG------AG 170
VPH18 CAAGACATAGAAATAACCTGTGTATATTGCAAGACAGTATTGGAACTTACAG------AG 173
VPH45 CAAGACGTATCTATTGCCTGTGTATATTGCAAAGCAACATTGGAACGCACAG------AG 170
canino CTTGATCTGTCGCTTGCTTGCAAATTTTGTGGCAATAATATAACAAATATAG------AA 173
equino CCTATGCTAGGGAAACTATGTATGTGGTGCCATGAGCCACTGACCAATCTGG------AC 69
bovino CAT-TCTCAGGGTTGGATTGTCTGTGGTGCAGAGAGCCTCTTACAGAAGTTG------AT 114
Fringilla CATAGGG-GCACAAGGACCTCCTGGGGGACAACCGTCCAATAACCCAAGTGA-----GAA 71
* *
VPH6 ATTTATTCATATGCATATAAACAGCTAAAGGTCCTGTTTCGAGGCGGCTATCCATATGCA 228
VPH11 ATATATGCATATGCCTATAAGAACCTAAAGGTTGTGTGGCGAGACAACTTTCCCTTTGCA 227
ximpanzé GTTTATTCATTTGAGTATAAGGATTTATATATTGTGTGGCGNGGCAATTTTCCATTTGCT 232
VPH16 GTATATGACTTTGCTTTTCGGGATTTATGCATAGTATATAGAGATGGGAATCCATATGCT 226
VPH31 GTATTAGATTTTGCATTTACAGATTTAACAATAGTATATAGGGACGACACACCACACGGA 230
VPH18 GTATTTGAATTTGCATTTAAAGATTTATTTGTGGTGTATAGAGACAGTATACCCCATGCT 233
VPH45 GTATATCAATTTGCTTTTAAAGATTTATGTATAGTGTATAGAGACTGTATAGCATATGCT 230
canino AAGCTGCTTTTTGATAAAGCTGGTTTTCAGTTAATCTGGCGAGAAAACAACGCATTTGGA 233
equino GCACTGAACTTTCTTGAGTGTAACCTCTCTATGGTCTGGAGGAACGGGACGCCATACGGC 129
bovino GCTTTTAGGTGCATGGTCAAAGACTTTCATGTTGTAATTCGGGAAGGCTGTAGATATGGT 174
Fringilla CAATTTCAATCCAGAGGATTGGGATATCCTACTGGATACTGACTCTAGTTCTGGTTCTGA 131
* *
VPH6 GCCTGCGCGTGCTGCCTAGAATTTCATGGAA-AAATTAACCAAT---ATAGACACTTTGA 284
VPH11 GCGTGTGCCTGTTGCTTAGAACTGCAAGGGA-AAATTAACCAAT---ATAGACACTTTAA 283
ximpanzé GCCTGTGCATATTGTTTGGAATTACAAGGAA-AAGTTAATCAGT---ATAGGCATTTTGA 288
VPH16 GTATGTGATAAATGTTTAAAGTTTTATTCTA-AAATTAGTGAGT---ATAGACATTATTG 282
VPH31 GTGTGTACAAAATGTTTAAGATTTTATTCAA-AAGTAAGTGAAT---TTAGATGGTATAG 286
VPH18 GCATGCCATAAATGTATAGATTTTTATTCTA-GAATTAGAGAAT---TAAGACATTATTC 289
VPH45 GCATGCCATAAATGTATAGACTTTTATTCCA-GAATTAGAGAAT---TAAGATATTATTC 286
canino TGCTGTCAGTACTGTGCAAGAGTCTGCAGCG-TTGTGGAGCAATGTTTTGGAAGCCACAG 292
equino GCGTGTAAGGCGTGTGTGGAGTTCCAGTGCT-TTCTGGAGGTCTATCTACACAGCGAAGG 188
bovino GCATGTACCATTTGTCTTGAAAACTGTTTAG-CTACTGAAAGAAGACTTTGGCAAGGTGT 233
Fringilla GACTGAAACTGCAGAAGCAACCTCTCCTTCATCTTCTGAAGAGTCTGCTGAGTTCGACTG 191
** *
VPH6 TTATGCTGGATATGCAACAACTGTTGAAGAAGAAACTAAACAAGACATTTTAGACGTGCT 344
VPH11 TTATGCTGCATATGCACCTACAGTAGAAGAAGAAACCAATGAAGATATTTTAAAAGTGTT 343
ximpanzé CTATGCTGCATATGCTGTAACAGTGGAAGAAGAAACAAATAAGTCAATATTTGATATAAG 348
VPH16 TTATAGTTTGTATGGAACAACATTAGAACAGCAATACAACAAACCGTTGTGTGATTTGTT 342
VPH31 ATATAGTGTGTATGGAACAACATTAGAAAAATTGACAAACAAAGGTATATGTGATTTGTT 346
VPH18 AGACTCTGTGTATGGAGACACATTGGAAAAACTAACTAACACTGGGTTATACAATTTATT 349
VPH45 AAACTCTGTATATGGAGAGACACTGGAAAAAATAACTAATACAGAGTTGTATAATTTGTT 346
canino ACACTTGACTTCTGAGGAGCTTGTCAACGTAACAAAGACCTTGCAGCAGCTTAGTCT--- 349
equino CGACTATAGGCCCCGTGAGGTAGCGCAGGAGGTGGGA---CGGTCCCTCTGTGATGTGCG 245
bovino TCCAGTAACAGGTGAGGAAGCT---GAATTATTGCATGGCAAAACACTTGATAGGCTTTG 290
Fringilla GGAAGTGAAACTTATCGTAACAGGTAACAGTCAGGACCCTATAACCCTGCAGGAGCT--- 248
* *
VPH6 AATTCGGTGCTACCTGTGTCACAAACCGCTGTGTGAAGTAGAAAAGGTAAAACATATACT 404
VPH11 AATTCGTTGTTACCTGTGTCACAAGCCGTTGTGTGAAATAGAAAAACTAAAGCACATATT 403
ximpanzé AATTAGATGCTATTTGTGCCACAAACCATTGTGTGCCGTGGAAAAAGTAAGACACATTTT 408
VPH16 AATTAGGTGTATTAACTGTCAAAAGCCACTGTGTCCTGAAGAAAAGCAAAGACATCTGGA 402
VPH31 AATTAGGTGTATAACGTGTCAAAGACCGTTGTGTCCAGAAGAAAAACAAAGACATTTGGA 406
VPH18 AATAAGGTGCCTGCGGTGCCAGAAACCGTTGAATCCAGCAGAAAAACTTAGACACCTTAA 409
VPH45 AATAAGGTGCCTGCGGTGCCAGAAACCATTGAACCCAGCAGAAAAACGTAGACACCTTAA 406
canino ---TAGATGTTTAGGATGCCTCAGTATTCTGAGTGAGGCGGACAAA--GAACTATGTGCT 404
equino AGTACGGTGCTGGTCCTGCAGCAAGCCCCTGACGAAGAACGAGAAGCAGGAAATAGAGCT 305
bovino CATAAGATGCTGCTACTGTGGGGGCAAACTAACAAAAAATGAAAAACATCGGCATGTGCT 350
Fringilla --TGAGGATCTTAACCAGGTGTTGGTAGCCGAGCTTGGACATCCTGCTACTGTTTATAGC 306
* *
VPH6 AACCAAGGCACGGTTCATAAAGCTAAAT---TGTACGTGGAAGGGTCGCTGCCTACACTG 461
VPH11 GGGAAAGGCACGCTTCATAAAACTAAAT---AACCAGTGGAAGGGTCGTTGCTTACACTG 460
ximpanzé GGAGAAGGCGCGATTTATTAAATTAAAC---TGCGAGTGGAAAGGGCGCTGCTTTCATTG 465
VPH16 CAAAAAGCAAAGATTCCATAATATAAGG---GGTCGGTGGACCGGTCGATGTATGTCTTG 459
VPH31 TAAAAAGAAACGATTCCACAACATAGGA---GGAAGGTGGACAGGACGTTGCATAGCATG 463
VPH18 TGAAAAACGACGATTTCACAACATAGCT---GGGCACTATAGAGGCCAGTGCCATTCGTG 466
VPH45 GGACAAACGAAGATTTCACAGCATAGCT---GGACAGTACCGAGGGCAGTGTAATACATG 463
canino GAATTGAACGATTTTTCTGTGGTCAGGG---GGAAAAC-TAGGGGCTTGTGTTCGCTGTG 460
equino GCTGGGGAAGCCATTAACGAAGGTGCGCCACAAGGAGTGGAGAGCTCTGTGCTACAACTG 365
bovino TTTTAATGAGCCTTTCTGCAAAACCAGAGCTAACATAATTAGAGGACGCTGCTACGACTG 410
Fringilla ATTCAAGACCAAGCCGATGGGGCTTCCT-----ACCCTCCTGGGTCTCCTACTCCTTCTA 361
* * *
VPH6 CTGGAC--------------AAC------------------------------------- 470
VPH11 CTGGAC--------------AAC------------------------------------- 469
ximpanzé CTGGAC--------------ATC------------------------------------- 474
VPH16 TTGCAGAT-----CATCAAGAAC----------ACGTAGAGAAACCCAGCTGTA------ 498
VPH31 TTGGAG-----------AAGACC----------TCGTACTGAAACCCAAGTGTA------ 496
VPH18 CTGCAACCGAGCACGACAGGAACGACTCCAACGACGCAGAGAAACACAAGTATAATATTA 526
VPH45 TTGTGACCAGGCACGGCAAGAAAGACTTCGCAGACGTAGGGAAACACAAGTATAGCAATA 523
canino CCGATT--------------ACC------------------------------------- 469
equino CGGTCTGC---------CACGAC------------------------------------- 379
bovino CTGCAGACATG--GTTCAAGGTC-----CAAATACCCATAGAAACTTGGATGAT------ 457
Fringilla CTTCTACTTTTCCTTTTGAGACT------------CCTCAGGGGAATAATCAGT------ 403
VPH6 ---ATGCATGGAAGACATGTTACCCTAAAGGATATTGTATTAGACCTGCAACCTCCAGAC 527
VPH11 ---ATGCATGGAAGACTTGTTACCCTAAAGGATATAGTACTAGACCTGCAGCCTCCTGAC 526
ximpanzé ---ATGCATGGAAAATATCCTACCTTAAAGGACATTGTGTTACACCTGAG---TCCTGAC 528
VPH16 ATCATGCATGGAGATACACCTACATTGCATGAATATATGTTAGATTTGCAACCAGAGA-- 556
VPH31 AACATGCGTGGAGAAACACCTACGTTGCAAGACTATGTGTTAGATTTGCAACCTGAGG-- 554
VPH18 AGTATGCATGGACCTAAGGCAACATTGCAAGACATTGTATTGCATTTAGAGCCCCAAAAT 586
VPH45 AGTATGCATGGACCCCGGGAAACACTGCAAGAAATTGTATTGCATTTGGAACCTCAGAAT 583
canino ACCATGATTGGGCAATGCGCAACCCTTTTGGATATTGTGCTGACAGAGCAGCCGGAG--- 526
equino ATGATAGGGAATGGCTCCCCGTCATTGAGGGAGATTGTTCTATCTGAGCTACCGCAAAGC 439
bovino -TCACCTGCAGGACCGTTGCTG-ATTTTAAGTCCATGTGCAGGCACACCTACCAGGTCTC 515
Fringilla -TTACTAGCATGGCTGTTGCAGGTTCATCCGCTGCTGCTGACCCTCCTTCATTTCCTAGT 462
* *
VPH6 ---------CCTGTAGGGTTA----CATTGCTATGAGCAATTAGTAGACAGCTCAGAAGA 574
VPH11 ---------CCTGTAGGGTTA----CATTGCTATGAGCAATTAGAAGACAGCTCAGAAGA 573
ximpanzé ---------CCTGTAGGTCTA----CATTGCAATGAGCAATTAG---ACAGCTCAGAAGA 572
VPH16 ----------CAACTGATCTC----TACTGTTATGAGCAATTAAATGACAGCTCAGAGGA 602
VPH31 ----------CAACTGACCTC----CACTGTTATGAGCAATTACCCGACAGCTCAGATGA 600
VPH18 GAAAT---TCCGGTTGACCTT----CTATGTCACGAGCAATTAAGCGACTCAGAGGAAGA 639
VPH45 GAATTAGATCCTGTTGACCTG----TTGTGTTACGAGCAATTAAGCGAGTCAGAGGAGGA 639
canino ---------CCGATAGACTTG----CAATGCTATGAACAATTACC--ATCG-TCTGACGA 570
equino ---------CTGGCAGACCCA----G-----CAGAAGCGGAAAGC----------GAAGA 471
bovino CTGCAGCACCTGATGCACCTGATTTCAGACTTCCGTGCCATTTCG-GCCGTCCTACTAGG 574
Fringilla CCTGCAAGCGTTGTAGACCTT----GTTTGTCACGAAAGCATGGGTGACAGTGACGTTGA 518
*
VPH6 TGAGGTGGACGAAGTGGACGGACAAGATTCACAACCTTT------AAAACAACA---TTA 625
VPH11 TGAGGTGGACAAGGTGGACAAACAAGACGCACAACCTTT------AACACAACA---TTA 624
ximpanzé TGAGGTGGACGAACAAGCCACGCAAGCCACGCAAGCCACGCAACGAATCCAACAAGCTTA 632
VPH16 GGAGGATGAAATAGATGGT-CCAGC--TGGACAAGCAG--AACCGGACAGAGCCCA-TTA 656
VPH31 GGAGGATGTCATAGACAGT-CCAGC--TGGACAAGCAG--AACCGGACACATCCAA-TTA 654
VPH18 AAACGATGAAATAGATGGAGTTAATCATCAACATTTACC-AGCCCGACGAGCCGAA-CCA 697
VPH45 AAACGATGAAGCAGATGGAGTTAGTCATGCACAACTACC-AGCCCGACGAGCCGAA-CCA 697
canino GGAGGAGGAGGAGGAGGA-----------GCCAACTGA--------AAAAAATGT--TTA 609
equino GGAGGAGGTGGAGGTGGAATTGGACGCCGTCCGACCTC--------AGGCGCCA----TA 519
bovino AAGCGAGGTCCCACTACCCCTCCGCTTTCCTCTCCCGGAAAACTGTGTGCAACAGGGCCA 634
Fringilla TGAGGAGGAGCACCTACCTAATAATCCTGCCAACACCCC-----TGAGGAGTCAGGAGCA 573
* * *
VPH6 CCAAATAGTGACCTGTTGC--------TGTG---GATGTGACAGCAACGTTCGACTGGTT 674
VPH11 CCAAATACTGACCTGTTGC--------TGTG---GATGTGACAGCAACGTCCGACTGGTT 673
ximpanzé CCAAATAGTGACCAGTTGT--------GGTC---ACTGTAATAACACCGTGCGTCTGGTT 681
VPH16 CAATATTGTAACCTTTTGT--------TGCA---AGTGTGACTCTACGCTTCGGTTGTGC 705
VPH31 CAATATCGTTACCTTTTGT--------TGTC---AGTGTAAGTCTACACTTCGTTTGTGT 703
VPH18 CAACGTCACACAATGTTGTGTATGTGTTGTA---AGTGTGAAGCCAGAATTGAGCTAGTA 754
VPH45 CAGCGTCACAAAATTTTGTGTGTATGTTGTA---AGTGTGACGGCAGAATTGAGCTTACA 754
canino CAGAATAGAGGCTGCCTGT--------GGAT---TTTGTGGGAAAGGGGTGAGGTTTTTT 658
equino CGCCGTGTGTACCGTCTGC--------TGCC---GCTGCGGAGAAAAAGTTGGACTTTGT 568
bovino CGTCGAGTGTATTCTGTGACTGTCTGCTGTGGAAACTGCGGAAAAGAGCTGACTTTTGCT 694
Fringilla AATGATACAGAATTTAAGT---------GTA--CCATATGTAGTAAGCCTCTTACTGA-- 620
* * * * *
VPH6 GTGCAGTGTACAGAAACAGACATCAGAGAAGTGCAACAGCTTCTGTTGGGAACACTAAAC 734
VPH11 GTGGAGTGCACAGACGGAGACATCAGACAACTACAAGACCTTTTGCTGGGCACACTAAAT 733
ximpanzé GTGGAGTGTACAGGACCTGACATTCAACACCTACACAACTTGCTGCTGGGCTCATTGAAT 741
VPH16 GTACAAAGCACACACGTAGACATTCGTACTTTGGAAGACCTGTTAATGGGCACACTAGGA 765
VPH31 GTACAGAGCACACAAGTAGATATTCGCATATTGCAAGAGCTGTTAATGGGCTCATTTGGA 763
VPH18 GTAGAAAGCTCAGCAGACGACCTTCGAGCATTCCAGCAGCTGTTTCTGAACACCCTGTCC 814
VPH45 GTAGAGAGCTCGGCAGAGGACCTTAGAACACTACAGCAGCTGTTTTTGAGCACCTTGTCC 814
canino TGTCTGTCTCAAAAAGAGGATCTGCGTGTGCTGCAGGTCACTTTGCTGAGC---CTCAGC 715
equino GTGCTTGCAACCGACGAGGGAATACACGGCTTAGAAGAGCTTCTCTTTGAGGCTCTGCAG 628
bovino GTGAAGACCAGCTCGACGTCCCTGCTTGGATTTGAACACCTTTTAAACTCAGATTTAGAC 754
Fringilla GGGAGAGCTGGATGAATGGGGATTAGTGCAAGGAGATGAGGGTCTCTGCCACTTCTGCGG 680
* *
VPH6 ATAGTGTGTCCCATCTGCGCACCGAA-GACATAA-CAACGATGGCGGACGATTCAGGTAC 792
VPH11 ATTGTGTGTCCCATCTGCGCACCAAA-ACCATAA-CAAGGATGGCGGACGATTCAGGTAC 791
ximpanzé ATAGTGTGCCCGTTGTGTGCTCCACA-AACTTAA-GAAGGATGGCAGACGATACAGGTAC 799
VPH16 ATTGTGTGCCCCATCTGTTCTCAGAA-ACCATAATCTACCATGGCTGATCCTGCAGGTAC 824
VPH31 ATCGTGTGCCCCAACTGTTCTACTAG-ACTGTAA-CTACAATGGCTGATCCAGCAGGTAC 821
VPH18 TTTGTGTGTCCGTGGTGTGCATCCCA-GCAGTAAGCAACAATGGCTGATCCAGAAGGTAC 873
VPH45 TTTGTGTGTCCGTGGTGTGCAACTAA-CCAATAATCTACAATGGCGGATCCAGAAGGTAC 873
canino CTGGTGTGCACCACCTGTGTGCAGACCGCCAAGCTTGACCATGGCGGCTAGAAAAGGTAC 775
equino CTTTTCTGCGCCCAGTGTGCCCCCCCCATCGGTCGCCATGGACGCTGAGGAAGCAGGTAC 688
bovino CTCTTGTGTCCACGTTGTGAATCTCG---CGAGC---GTCATGGCAAACGATAAAGGTAG 808
Fringilla CTTTGGTGCAGGTGTCGTCGATTTCTTCCCGTAA-TGGACTTTATAGATACTGAAGCAGC 739
* ** * **
VPH6 ---AGAAAATGA---GGGGTCTGGGTGTACAGGATGGTTTATGGTAGAAGCT-ATAGTGC 845
VPH11 ---AGAAAATGA---GGGGTCGGGGTGTACAGGATGGTTTATGGTAGAAGCC-ATAGTAG 844
ximpanzé ---AGACAATGA---GGGGACGGGATGTTCAGGATGGTTTTTAGTAGAGGCC-ATAGTAG 852
VPH16 ---CAATGGGGAAGAGGGTACGGGATGTAATGGATGGTTTTATGTAGAGGCT-GTAGTGG 880
VPH31 ---AGATGGGGA---GGGGACGGGATGCAATGGTTGGTTTTATGTAGAAGCA-GTAATTG 874
VPH18 ---AGACGGGGA---GGGCACGGGTTGTAACGGCTGGTTTTATGTACAAGCT-ATTGTAG 926
VPH45 ---CGACGGGGA---GGGAACGGGGTGTAATGGCTGGTTCTTTGTAGAAACA-ATTGTAG 926
canino ---TGACTCTGA------GACTGAGGATGGTGGTTGGGTACTAATAGAGGCAGATTGTAG 826
equino GCCTGTGAGAGATGCAGGTACCC-CTGTCAGGGAAGGCTCCTCATGGTTTCT-GCAGCA- 745
bovino ---CAATTGGGATTCGGGCTTGGGATGCTC---ATATCTGCTGACTGAGGCAGAATGTGA 862
Fringilla TGTTGAAGGTGATA-GCAACCCATCTTCCTCTGAGAGCGACT------------------ 780
**
VPH6 AACACCCAACAGGTACACAAATATCAGACGATGAGGATGAGGAGGTGGAGGACAG----- 900
VPH11 AGCACACTACAGGTACACAAATATCAGAAGATGAGGAAGAGGAGGTGGAGGACAGT---- 900
ximpanzé ATAAAACAACTGGAGAACAGGTATCAGATGACGAGGATGAAACAGTGG------------ 900
VPH16 AAAAAAAAACAGGGGATGCT---------------------------------------- 900
VPH31 ACAGACAGACAGGGGACAACATTTCA---------------------------------- 900
VPH18 ACAAAAAAACAGGAGATGTAATATCAGATGACGA-------------------------- 960
VPH45 AGAAAAAAACAGGGGATGTAATATCAGATGATGA-------------------------- 960
canino TGAGGTAGACTCTGCAGATGAAACCAGTGAAAATGCAAGTAATGTCTCTGATCTTGTAGA 886
equino AGAGGCAGACTGTAGTGATATGGACGGTAGCGAGG------------------------- 780
bovino AAGTGACAAAGAGAATGAGGAACCCGGGGCAGGTGTAG---------------------- 900
Fringilla ------------------------------------------------------------
VPH6 --------------
VPH11 --------------
ximpanzé --------------
VPH16 --------------
VPH31 --------------
VPH18 --------------
VPH45 --------------
canino CAATGCGAGCATTG 900
equino --------------
bovino --------------
Fringilla --------------
|
(
(
equino:0.45741,
canino:0.44259)
:0.02087,
(
bovino:0.47034,
Fringilla:0.47838)
:0.02686,
(
(
ximpanzé:0.13851,
(
VPH6:0.06385,
VPH11:0.07504)
:0.05426)
:0.10616,
(
(
VPH16:0.12896,
VPH31:0.12882)
:0.06229,
(
VPH18:0.08483,
VPH45:0.08496)
:0.11392)
:0.06176)
:0.21089);
| 
