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Faculty

The master of bioinformatics has a faculty staff with both a long experience in teaching and research careers widely recognized. To implement this master, expert researchers have been selected in each of the subjects taught. As an example, more than 20 participating researchers from up to 6 different departments at UAB, : i) Computer Architecture and Operating Systems; ii) Biochemistry and Molecular Biology; iii) Genetics and Microbiology, iv) Mathematics, v) Pediatrics, Obstetrics and Gynecology and Preventive Medicine, and vi) Chemistry. The profile of these researchers is also diverse: professors, associate professors, postdocs, researchers ICREA, Ramón y Cajal researchers, among others.

Besides UAB professors, researchers of CRAG (Genomics Research Center) and other research centers and hospital institutes (IibSant PauIrsiCaixa, VHIR) also lecture in this master. Throughout the master also it will have the visit of prestigious national and international researchers and entrepreneurs in the world of bioinformatics and genomics, who will share their experiences to our students.

 

Antonio Barbadilla

Dr. Antonio Barbadilla

Professor and researcher at the Institute of Biotechnology and Biomedicine (IBB) and the Department of Genetics and Microbiology

antonio.barbadilla@uab.cat

 


Dr. Mario Cáceres

ICREA researcher professor at the Institute of Biotechnology and Biomedicine (IBB)

mario.caceres@uab.cat


 

 Dr. Sònia Casillas

Tenured assistant professor and researcher at the Institute of Biotechnology and Biomedicine (IBB) and the Department of Genetics and Microbiology


sonia.casillas@uab.cat

  

 Arnau Cordomi

 Dr. Arnau Cordomi

Postdoctoral Researcher

Laboratori de Medicina Computacional, UAB

arnau.cordomi@uab.cat

 

Dr. Xavier Daura

ICREA research professor and Director of the Institute of Biotechnology and Biomedicine (IBB).

xavier.daura@uab.cat

 

 

Dr. Yolanda Guillén

Posdoctoral research, Retrovirology Lab 

Hospital Universitari Germans Trias i Pujol

 

yguillen87@gmail.com

 

 

Dr. Raquel Egea

Postdoctoral researcher at the Institute of Biotechnology and Biomedicine (IBB) and associate professor at the Department of Genetics and Microbiology


raquel.egea@uab.cat  

 

 

Dr. Antonio Espinosa

Postdoctoral researcher at the Department of Computer Architecture and Operating Systems 

antoniomiguel.espinosa@uab.cat

 

Dr. Angel González

Research Assistant

Laboratori de Medicina Computacional, UAB

Angel.Gonzalez@uab.cat

Dr. Juan Ramón González

Assistant Research Professor at the Center for Research in Environmental Epidemiology (CREAL) and Associate Professor at the Department of Mathematics

jrgonzalez@creal.cat

 smarco

Dr. Santiago Marco

Research assistant professor at the Department of Computer Architecture and Operating Systems

santiago.marco@uab.cat

 

Dr. Jean-Didier Maréchal

Research professor at the Department of Chemistry

jeandidier.marechal@uab.cat

Dr. Laura Masgrau

Senior researcher at the Institute of Biotechnology and Biomedicine (IBB).

Research web site

laura.masgrau@gmail.com

 

Dr. Juan Carlos Moure

Professor and researcher at the Department of Computer Architecture and Operating Systems 

juancarlos.moure@uab.cat

 Dr. Leonardo Pardo

Full professor at the Department of Pediatrics, Obstetrics and Gynecology and Preventive Medicine

 

Dr. Miguel Pérez Enciso

ICREA research professor at the Center for Research in Agricultural Genomics (CRAG)

miguel.perez@uab.cat

 

Dr. Pere Puig

Full professor and Head of Department of Mathematics 


ppuig@mat.uab.cat

 

Dr. Sebastián E. Ramos-Onsins

Ramón y Cajal Research Position at the Centre of Research in Agricultural Genomics (CRAG).

Personal Web

sebastian.ramos@cragenomica.es

 

Dr. Alfredo Ruiz

Full professor at the Department of Genetics and Microbiology

alfredo.ruiz@uab.cat

Dr. Daniel Yero

Tenured assistant professor and researcher at the Institute of Biotechnology and Biomedicine (IBB) and the Department of Genetics and Microbiology.

Research group: Bacterial Molecular Genetics

daniel.yero@bioinf.uab.es

 


Visiting professors and lecturers

 



Dr. Josep F Abril

Genetics Department, Universitat de Barcelona (UB)
Computational Genomics Lab

jabril@ub.edu

 

Dr. Murat Cokol

Postdoctoral researcher at Harvard Medical School

Faculty of Engineering and Natural Sciences, Sabanci University, Turkey

cokol@sabanciuniv.edu

 

Dr. Cedric Notredame

Comparative Bioinformatics Group

CRG - Center for Genomic Regulation

cedric.notredame@crg.es


Dr. Baldomero Oliva

Department of Experimental and Health Sciencies, Universitat Pompeu Fabra (UPF)

Structural Bioinformatics Group
Research group on biomedical informatics (GRIB)

baldo.oliva@upf.edu

 

Dr. Emanuele Raineri

Bioinformatics Statistical Genomics Team

National Center of Genomic Analysis CNAG)


emanuele.raineri@gmail.com


Dr. Isaac Salazar

Researcher and the Institute of Biotechnology, Helsinki University, and visiting professor at the Department of Genetics and Microbiology, Universitat Autònoma de Barcelona

isalazar@mappi.helsinki.fi

 

Invited Speakers


Closing Conference Module 1.

Killer-mobiles: the way towards energy efficient High Performance Computers?

Dr. Mateo Valero

Director of the Barcelona Supercomputing Center (BSC-CNS).

Webpage


Closing Conference Module 1.

Killer-mobiles: the way towards energy efficient High Performance Computers?

Dr. Roderic Guigó
Group Leader of Computational Biology of RNA Processing
Center for Regulaiton genomics (CRG)

Webpage


 


 Closing Conference Module 1.  

The bioinformatics challenges found in a genomics facility

Dr. Simon Heath

Bioinformatics Development group and Team Leader of the Statistical Genomics team (CNAG). 

Webpage


  

 

 

Closing Conference Module 1.  

Conda, Galaxy and Docker for reproducible and accessible research!

Dr. Björn Grüning 

Head fo the Freiburg Galaxy Team at University of Freiburg. 

 


  

Closing Conference Module 2.

System Biology: Perspectives

Dr. Luís Serrano

Director of the Centre for Genomic Regulation, Barcelona (Spain)

Webpage


 

 Closing Conference Module 2.

A network biology approach to novel therapeutic strategies

Dr. Patrick Aloy

ICREA Research Professor, ERC Consolidator Grant

Webpage


 

 

 

 Closing Conference Module 2.

Tumour genomes shed light into mutational processes and cancer vulnerabilities

Dr. Núria López-Bigas

Group Leader of the Biomedical Genomics group at the IRBB & ICREA Research Professor at the UPF
Prize Banc Sabadell Research 2016

Webpage


 

 

 Closing Conference Module 3.

Needs and applications of genomics in HIV

Dr. Javier Martínez Picado

ICREA Research Professor at IrsiCaixa (Institut de Recerca de la Sida).

Associate professor at the Department of Medicine of the UAB.

First prize in the 2012 "Vanguardia de la Ciència" competition 

Webpage 


 

 Closing Conference Module 3.

Plant genomics: Harvesting Genes for agriculture

Dr. Jordi García Mas

Head of the Genomics and Biotechnological Program 

(CRAG. Centre de Recerca en Agrigenòmica. IRTA-CSIC-UAB) 

Webpage


 

 

Bioinformatics and Business

Systems biology tools for disease research

Dr. Andrej Bugrim

Vice President, Informatics Strategy IP & Science

GeneGo, a Thomson Reuters business  


 


2014 Hot Research Topic: Regulatory Genomics

Investigating the relationship between geno- and phenotypic variation using regulatory genomics: a human and a Drosophila tale 

Dr. Bart Deplancke

Professor of the École Polytechnique Fédérale de Lausanne, Switzerland 

Deplancke's Lab


 

 2015-16 Hot Research Topic: Genetic basis of phenotypes

Discovering the genetic basis of phenotypes  

Dr. Paul O’Reilly 

Senior Lecturer in Statistical Genetics at the MRC SGDP Centre, King College London  

Pauloreilly -info


 

  

 

 

2016-17 Hot Research Topic: Modular evolution

Modular evolution of protein coding genes

Dr. Erich Bornberg-BauerMolecular Evolution and Bioinformatics. Bornberg LabUniversity of Münster


 

 

 

2017-18 Hot Research Topic: Paleogenomics.

Paleogenomics and European Prehistory 

Dr. Carlos Lalueza Fox

CSIC Research Scientist (Institute of Evolutionary Biology, IBE). 

Webpage


 

 

 

2018-19 Hot Research Topic: 3D Genomics

3D Genomics 

Dr. Marc Antonio Martí Renom

CREA Research Professor, Structural Genomics Group, CNAG-CRG 

Webpage


 

2019-20 Hot Research Topic: Genomics of rare diseases

Bioinformatics for Rare Disease research 

Dr. Sergi Beltrán

Head of the Bioinformatics Unit, CNAG-CRG

Webpage


 

 

2020-21 Hot Research Topic: Covid-19 Pandemics

The COVID-19 Host Genetics Initiative: a world-wide open effort to advance COVID-19 genetic research

Dr. Andrea Ganna
Research EMBL-Group Leader in the Finland Institute of Molecular Medicine (FIMM) at the University of Helsinki 

Webpage


 

 

 

Bioinformatics resources 

Library resources for Bioinformatics research

Tomàs Fabregat

Research support librarian, UAB 


 

 

 

Horizon 2020 

Bioinformatics opportunities in Europe 

Dr. Margarita Navia 

Head of Strategic Projects 
Barcelona Institute of Science and Technology (BIST)


 

 

Entrepreneurship and Bioinformatics

Entrepreneurship in Biotech projects

Dr. Jordi Vinaixa

Academic Director at ESADE Entrepreneurship Institute. 

Webpage


 

 

© MSc in Bioinformatics Master in Bioinformatics Faculty Biosciences, University Autonoma Barcelona (UAB) http://MScBioinformatics.uab.cat